RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 OBP2BQ9NPH6 170 aa5.23□□□□□ -1.57
PABPC1-223ENST00000523636 MED4Q9NPJ6 270 aa5.23□□□□□ -1.57
PABPC1-223ENST00000523636 RRAGDQ9NQL2 400 aaPredicted RBP5.23□□□□□ -1.57
PABPC1-223ENST00000523636 ZNF71Q9NQZ8 489 aaPredicted RBP5.23□□□□□ -1.57
PABPC1-223ENST00000523636 WSB2Q9NYS7 404 aaPredicted RBP5.23□□□□□ -1.57
PABPC1-223ENST00000523636 AFF4Q9UHB7 1163 aaKnown RBP5.23□□□□□ -1.57
PABPC1-223ENST00000523636 ARHGAP26Q9UNA1 814 aa5.23□□□□□ -1.57
PABPC1-223ENST00000523636 TRAF3IP3Q9Y228 551 aa5.23□□□□□ -1.57
PABPC1-223ENST00000523636 KCTD3Q9Y597 815 aa5.23□□□□□ -1.57
PABPC1-223ENST00000523636 SLC30A1Q9Y6M5 507 aa5.23□□□□□ -1.57
PABPC1-223ENST00000523636 AP1M2Q9Y6Q5 423 aa5.23□□□□□ -1.57
PABPC1-223ENST00000523636 MYH10P35580 1976 aa5.23□□□□□ -1.57
PABPC1-223ENST00000523636 ABCA4P78363 2273 aa5.23□□□□□ -1.57
PABPC1-223ENST00000523636 NEDD4P46934 1319 aa5.23□□□□□ -1.57
PABPC1-223ENST00000523636 MGAM2Q2M2H8 2515 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 A0A0B4J269 797 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 A0A1W2PPL8 197 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SH3D21A4FU49 640 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 GOLGA6L4A6NEF3 574 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 GOLGA8AA7E2F4 631 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 GOLGA8BA8MQT2 603 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 TMEM189-UBE2V1I3L0A0 370 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SYT5O00445 386 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 RIPK2O43353 540 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 ERAL1O75616 437 aaKnown RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SIX3O95343 332 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SLU7O95391 586 aaKnown RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 KNG1P01042 644 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 THP07101 528 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 PDHA1P08559 390 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SNRNP70P08621 437 aaKnown RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 ALOX15P16050 662 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 PI3P19957 117 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SYT1P21579 422 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 ACP1P24666 158 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 RPL13P26373 211 aaKnown RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 HTR1BP28222 390 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 GLRBP48167 497 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 DUSP3P51452 185 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 AGFG1P52594 562 aaKnown RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SLC26A5P58743 744 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 IL13RA1P78552 427 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 TRDNQ13061 729 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 ILKQ13418 452 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SSPNQ14714 243 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 PDGFRLQ15198 375 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 ZNF77Q15935 545 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 UBE2SQ16763 222 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 ANO6Q4KMQ2 910 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 CEP55Q53EZ4 464 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 DCAF6Q58WW2 860 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 C3orf38Q5JPI3 329 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 EOGTQ5NDL2 527 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 KLHDC7AQ5VTJ3 777 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 TPGS2Q68CL5 300 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 C11orf88Q6PI97 169 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SLC22A25Q6T423 547 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SLFN11Q7Z7L1 901 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 RHPN2Q8IUC4 686 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SPATA2LQ8IUW3 424 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 TBC1D10CQ8IV04 446 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 FAM114A1Q8IWE2 563 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 EFCAB13Q8IY85 973 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 ELMOD1Q8N336 334 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 STPG3Q8N7X2 389 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 KCTD6Q8NC69 237 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 CEP70Q8NHQ1 597 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 GPT2Q8TD30 523 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 OSCP1Q8WVF1 389 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 PTP4A1Q93096 173 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 EXOC4Q96A65 974 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 C18orf8Q96DM3 657 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 PPP1R13BQ96KQ4 1090 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 NLRP4Q96MN2 994 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 CCDC43Q96MW1 224 aaKnown RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 PWWP2AQ96N64 755 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 KCNC2Q96PR1 638 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 WDR24Q96S15 920 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 TACO1Q9BSH4 297 aaKnown RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 CRACR2AQ9BSW2 395 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 GPR174Q9BXC1 333 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SCAND2PQ9GZW5 306 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 KCMF1Q9P0J7 381 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SEPT10Q9P0V9 454 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 NOSIPQ9Y314 301 aaKnown RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 TDRD6O60522 2096 aaKnown RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 RYR1P21817 5038 aa5.22□□□□□ -1.57
PABPC1-223ENST00000523636 TNRC6AQ8NDV7 1962 aaKnown RBP5.22□□□□□ -1.57
PABPC1-223ENST00000523636 SYCE3A1L190 88 aa5.21□□□□□ -1.58
PABPC1-223ENST00000523636 MEI4A8MW99 385 aa5.21□□□□□ -1.58
PABPC1-223ENST00000523636 K7EM74 188 aa5.21□□□□□ -1.58
PABPC1-223ENST00000523636 NPC1O15118 1278 aa5.21□□□□□ -1.58
PABPC1-223ENST00000523636 CASC3O15234 703 aaKnown RBP5.21□□□□□ -1.58
PABPC1-223ENST00000523636 TSPAN1O60635 241 aa5.21□□□□□ -1.58
PABPC1-223ENST00000523636 CUTAO60888 179 aa5.21□□□□□ -1.58
PABPC1-223ENST00000523636 CSO75390 466 aaKnown RBP5.21□□□□□ -1.58
PABPC1-223ENST00000523636 NADKO95544 446 aaPredicted RBP5.21□□□□□ -1.58
PABPC1-223ENST00000523636 OPN1MWP04001 364 aa5.21□□□□□ -1.58
PABPC1-223ENST00000523636 OPN1MW2P0DN77 364 aa5.21□□□□□ -1.58
PABPC1-223ENST00000523636 OPN1MW3P0DN78 364 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms