RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 MAPK10P53779 464 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 GBE1Q04446 702 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 TCEAL1Q15170 157 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 MANEAQ5SRI9 462 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 LRRC38Q5VT99 294 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 SLC9A4Q6AI14 798 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 LYSMD3Q7Z3D4 306 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 ARHGAP22Q7Z5H3 698 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 GALNT13Q8IUC8 556 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 PLD5Q8N7P1 536 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 ZSCAN1Q8NBB4 408 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 CCDC112Q8NEF3 446 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 CCHCR1Q8TD31 782 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 CTNNBL1Q8WYA6 563 aaPredicted RBP12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 RAPGEF5Q92565 580 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 NKD1Q969G9 470 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 CCDC74BQ96LY2 380 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 ADGRE3Q9BY15 652 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 XPO4Q9C0E2 1151 aaKnown RBP12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 CARD9Q9H257 536 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 MAGEE1Q9HCI5 957 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 RAD18Q9NS91 495 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 KCNK4Q9NYG8 393 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 PKD2L2Q9NZM6 624 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 IFNKQ9P0W0 207 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 NFKBIL1Q9UBC1 381 aaPredicted RBP12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 ATMQ13315 3056 aa12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 FLNBO75369 2602 aaKnown RBP12.54□□□□□ -0.4
TOP1MT-217ENST00000523417 ANKRD36A6QL64 1941 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 KIR2DS5A0A0G2JLQ3 304 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 A0A0G2JNG1 304 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 GOLGA6CA6NDK9 693 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 GOLGA6BA6NDN3 693 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 KIR2DS3K7RE56 304 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 NUAK1O60285 661 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 MTA2O94776 668 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 GOLGA6DP0CG33 693 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 SLC2A4P14672 509 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 CSTF2P33240 577 aaKnown RBP eCLIP12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 EPHA4P54764 986 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 BIRC2Q13490 618 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 KIR2DS5Q14953 304 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 NKAIN2Q5VXU1 208 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 PDPK2PQ6A1A2 396 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 DOK6Q6PKX4 331 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 TMC3Q7Z5M5 1100 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 CPNE8Q86YQ8 564 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 BMPERQ8N8U9 685 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 AVL9Q8NBF6 648 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 CCNYQ8ND76 341 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 DTX3LQ8TDB6 740 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 SLC37A2Q8TED4 501 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 EID2BQ96D98 161 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 IMP4Q96G21 291 aaKnown RBP12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 TEFMQ96QE5 360 aaKnown RBP12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 TRIB3Q96RU7 358 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 SRPK1Q96SB4 655 aaKnown RBP12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 HERPUD2Q9BSE4 406 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 SLC12A9Q9BXP2 914 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 EPB41L1Q9H4G0 881 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 UCK1Q9HA47 277 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 STARD5Q9NSY2 213 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 GOLGA6AQ9NYA3 693 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 ZNHIT2Q9UHR6 403 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 PCDHGA4Q9Y5G9 962 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 ADGRG1Q9Y653 693 aa12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 OAS3Q9Y6K5 1087 aaKnown RBP12.53□□□□□ -0.4
TOP1MT-217ENST00000523417 SCN8AQ9UQD0 1980 aa12.52□□□□□ -0.4
TOP1MT-217ENST00000523417 C1orf232A0A0U1RR37 186 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 FADS2P1A8MWK0 482 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 CHUKO15111 745 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 CAPN5O15484 640 aaPredicted RBP12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 EML2O95834 649 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 TPM3P06753 285 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 ZFXP17010 805 aaPredicted RBP12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 ITGB6P18564 788 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 CSF2RBP32927 897 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 CD86P42081 329 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 RAB15P59190 212 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 DCDC1P59894 354 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 MC2RQ01718 297 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 SRSF6Q13247 344 aaKnown RBP12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 TRIM14Q14142 442 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 PDK1Q15118 436 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 TBR1Q16650 682 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 SLC9B2Q86UD5 537 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 TRIM74Q86UV6 250 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 RCBTB1Q8NDN9 531 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 LPCAT1Q8NF37 534 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 OR10G6Q8NH81 332 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 SLC35G2Q8TBE7 412 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 ZNF830Q96NB3 372 aaPredicted RBP12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 OLFM3Q96PB7 478 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 SLC38A3Q99624 504 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 ZPBPQ9BS86 351 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 PACSIN1Q9BY11 444 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 SLC25A51Q9H1U9 297 aa12.52□□□□□ -0.41
TOP1MT-217ENST00000523417 SUDS3Q9H7L9 328 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms