RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 WNT1P04628 370 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 SDHBP21912 280 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 AKT2P31751 481 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 SPAM1P38567 509 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 CLDN2P57739 230 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 GPX6P59796 221 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 XIAPP98170 497 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 BNC1Q01954 994 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 CRYMQ14894 314 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 SLMAPQ14BN4 828 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 PRAMEF14Q5SWL7 426 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 ALS2CLQ60I27 953 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 CAPN12Q6ZSI9 719 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 CCNJLQ8IV13 435 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 RAVER1Q8IY67 606 aaKnown RBP11.87□□□□□ -0.51
PVT1-215ENST00000522963 NRSN1Q8IZ57 195 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 AENQ8WTP8 325 aaKnown RBP11.87□□□□□ -0.51
PVT1-215ENST00000522963 PEX13Q92968 403 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 HDAC10Q969S8 669 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 SKA1Q96BD8 255 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 NUS1Q96E22 293 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 CDKN2AIPNLQ96HQ2 116 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 TBATAQ96M53 351 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 C19orf43Q9BQ61 176 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 SLC17A9Q9BYT1 436 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 ABCG8Q9H221 673 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 CDC42EP4Q9H3Q1 356 aaKnown RBP11.87□□□□□ -0.51
PVT1-215ENST00000522963 GAREM1Q9H706 876 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 SUDS3Q9H7L9 328 aaPredicted RBP11.87□□□□□ -0.51
PVT1-215ENST00000522963 IL21RQ9HBE5 538 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 IL26Q9NPH9 171 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 NINJ2Q9NZG7 142 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 ANKRD6Q9Y2G4 727 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 FAM169AQ9Y6X4 670 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 LRRK1Q38SD2 2015 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 CCDC162PA2VCL2 907 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 OR51F1A6NGY5 319 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 PRAMEF26H0Y7S4 382 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 H0Y8X5 98 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 H7C0S8 307 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 GAPDHSO14556 408 aaPredicted RBP11.86□□□□□ -0.51
PVT1-215ENST00000522963 RAD51BO15315 384 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 TTC4O95801 387 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 POLBP06746 335 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 HNRNPA2B1P22626 353 aaKnown RBP11.86□□□□□ -0.51
PVT1-215ENST00000522963 ARNTP27540 789 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 SSTR1P30872 391 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 HADHAP40939 763 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 ARCN1P48444 511 aaKnown RBP11.86□□□□□ -0.51
PVT1-215ENST00000522963 DCDC1P59894 354 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 IL9RQ01113 521 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 PEX6Q13608 980 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 PUM1Q14671 1186 aaKnown RBP eCLIP11.86□□□□□ -0.51
PVT1-215ENST00000522963 AGERQ15109 404 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 SMAD1Q15797 465 aaKnown RBP11.86□□□□□ -0.51
PVT1-215ENST00000522963 KYNUQ16719 465 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 HLA-BQ31612 363 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 SPANXN3Q5MJ09 141 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 KIAA0930Q6ICG6 404 aaPredicted RBP11.86□□□□□ -0.51
PVT1-215ENST00000522963 ZNF765Q7L2R6 523 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 PALM2Q8IXS6 379 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 UNC5BQ8IZJ1 945 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 PELI3Q8N2H9 469 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
PVT1-215ENST00000522963 ASB12Q8WXK4 309 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 SCAMP4Q969E2 229 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 PLEKHG4BQ96PX9 1271 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 AGAP2Q99490 1192 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 RTKNQ9BST9 563 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 RIOK2Q9BVS4 552 aaKnown RBP11.86□□□□□ -0.51
PVT1-215ENST00000522963 FAM83DQ9H4H8 585 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 LRRC4CQ9HCJ2 640 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 RAD18Q9NS91 495 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 IL1RAPL1Q9NZN1 696 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 NFKBIL1Q9UBC1 381 aaPredicted RBP11.86□□□□□ -0.51
PVT1-215ENST00000522963 DMTF1Q9Y222 760 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 FNDC3AQ9Y2H6 1198 aaKnown RBP11.86□□□□□ -0.51
PVT1-215ENST00000522963 USP34Q70CQ2 3546 aa11.86□□□□□ -0.51
PVT1-215ENST00000522963 SPTBN2O15020 2390 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 GLYATL1P3A0A0U1RQE8 302 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 A0A1W2PR77 199 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 VILLO15195 856 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 GPR39O43194 453 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 VAPBO95292 243 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 CER1O95813 267 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 GOT2P00505 430 aaKnown RBP11.85□□□□□ -0.51
PVT1-215ENST00000522963 PRSS56P0CW18 603 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 PAMP19021 973 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 MC4RP32245 332 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 CA5AP35218 305 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 NUDT1P36639 197 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 LIMK1P53667 647 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 PMS2P54278 862 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 PRAMEP78395 509 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 IRF4Q15306 451 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 CHRNA6Q15825 494 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 WSCD2Q2TBF2 565 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 HENMT1Q5T8I9 393 aaKnown RBP11.85□□□□□ -0.51
PVT1-215ENST00000522963 ZDHHC20Q5W0Z9 365 aa11.85□□□□□ -0.51
PVT1-215ENST00000522963 EMBQ6PCB8 327 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms