RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 MARCH4Q9P2E8 410 aaPredicted RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 PSAT1Q9Y617 370 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 HMGB1P1B2RPK0 211 aaPredicted RBP12.99□□□□□ -0.33
CPNE3-205ENST00000522240 WNT9AO14904 365 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 UGT1A9O60656 530 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 SYF2O95926 243 aaKnown RBP12.99□□□□□ -0.33
CPNE3-205ENST00000522240 SNRPAP09012 282 aaKnown RBP12.99□□□□□ -0.33
CPNE3-205ENST00000522240 GM2AP17900 193 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 LEPRP48357 1165 aaKnown RBP12.99□□□□□ -0.33
CPNE3-205ENST00000522240 CD151P48509 253 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 TTPAP49638 278 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 CLCN5P51795 746 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 ADPRHP54922 357 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 DNAJC3Q13217 504 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 ACOX1Q15067 660 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 ZNF284Q2VY69 593 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 ZRANB3Q5FWF4 1079 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 NLRP8Q86W28 1048 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 ZC3HC1Q86WB0 502 aaKnown RBP12.99□□□□□ -0.33
CPNE3-205ENST00000522240 TRAM1L1Q8N609 369 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 GANCQ8TET4 914 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 MZB1Q8WU39 189 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 EDAQ92838 391 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 ULK4Q96C45 1275 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 TLCD1Q96CP7 247 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 MRRFQ96E11 262 aaKnown RBP12.99□□□□□ -0.33
CPNE3-205ENST00000522240 NUS1Q96E22 293 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 ATP6V1G3Q96LB4 118 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 TTC1Q99614 292 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 PRRX2Q99811 253 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 ZSCAN5AQ9BUG6 496 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 WRAP53Q9BUR4 548 aaKnown RBP12.99□□□□□ -0.33
CPNE3-205ENST00000522240 FAM83DQ9H4H8 585 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 UGT1A7Q9HAW7 530 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 UGT1A10Q9HAW8 530 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 UGT1A8Q9HAW9 530 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 SENP1Q9P0U3 644 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 SIT1Q9Y3P8 196 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 LRRK1Q38SD2 2015 aa12.99□□□□□ -0.33
CPNE3-205ENST00000522240 FAM155BO75949 473 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 RECQL5O94762 991 aaPredicted RBP12.98□□□□□ -0.33
CPNE3-205ENST00000522240 APBB3O95704 486 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 PYGLP06737 847 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 ITGA2BP08514 1039 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 PMLP29590 882 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 ETV3P41162 512 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 POLD2P49005 469 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 TPMTP51580 245 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 MPP1Q00013 466 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 DPTQ07507 201 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 CTBP1Q13363 440 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 SEMA3AQ14563 771 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 ITIH4Q14624 930 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 CHRNA6Q15825 494 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 MAP7D1Q3KQU3 841 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 TMEM259Q4ZIN3 620 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 TTMPQ5BVD1 217 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 CWF19L1Q69YN2 538 aaKnown RBP12.98□□□□□ -0.33
CPNE3-205ENST00000522240 PSAPL1Q6NUJ1 521 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 Q6ZVL8 140 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 MTERF4Q7Z6M4 381 aaKnown RBP12.98□□□□□ -0.33
CPNE3-205ENST00000522240 PIANPQ8IYJ0 282 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 FLCNQ8NFG4 579 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 OR14C36Q8NHC7 312 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 HMGB4Q8WW32 186 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 ISL2Q96A47 359 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 VPS39Q96JC1 886 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 VPS35Q96QK1 796 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 GPR22Q99680 433 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 CENPHQ9H3R5 247 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 ASB8Q9H765 288 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 SGK2Q9HBY8 427 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 ITM2CQ9NQX7 267 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 FBXO6Q9NRD1 293 aaPredicted RBP12.98□□□□□ -0.33
CPNE3-205ENST00000522240 BCCIPQ9P287 314 aaKnown RBP eCLIP12.98□□□□□ -0.33
CPNE3-205ENST00000522240 TBK1Q9UHD2 729 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 CRLS1Q9UJA2 301 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 ACTL7BQ9Y614 415 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
CPNE3-205ENST00000522240 ZFHX2Q9C0A1 2572 aaPredicted RBP12.97□□□□□ -0.33
CPNE3-205ENST00000522240 LZTS3O60299 673 aaPredicted RBP12.97□□□□□ -0.33
CPNE3-205ENST00000522240 MMP20O60882 483 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 TM7SF2O76062 418 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 PCDH8O95206 1070 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 S1PR4O95977 384 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 AHSGP02765 367 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 KRT15P19012 456 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 ACRV1P26436 265 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 GABRB3P28472 473 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 ADARP55265 1226 aaKnown RBP12.97□□□□□ -0.33
CPNE3-205ENST00000522240 RPS21P63220 83 aaKnown RBP12.97□□□□□ -0.33
CPNE3-205ENST00000522240 DBN1Q16643 649 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 TIFABQ6ZNK6 161 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 RFLNAQ6ZTI6 216 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 MICALCLQ6ZW33 695 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 TRABD2AQ86V40 505 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 RBFAQ8N0V3 343 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 NXPE1Q8N323 547 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 CAMKK1Q8N5S9 505 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 ZNF398Q8TD17 642 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms