RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 LYSMD1Q96S90 227 aa18.37■□□□□ 0.53
TRAPPC9-210ENST00000521667 ATOH8Q96SQ7 321 aa18.37■□□□□ 0.53
TRAPPC9-210ENST00000521667 TRMOQ9BU70 441 aa18.37■□□□□ 0.53
TRAPPC9-210ENST00000521667 CPEB1Q9BZB8 566 aaKnown RBP18.37■□□□□ 0.53
TRAPPC9-210ENST00000521667 P2RY12Q9H244 342 aa18.37■□□□□ 0.53
TRAPPC9-210ENST00000521667 GSTO2Q9H4Y5 243 aa18.37■□□□□ 0.53
TRAPPC9-210ENST00000521667 SUV39H2Q9H5I1 410 aa18.37■□□□□ 0.53
TRAPPC9-210ENST00000521667 MARK1Q9P0L2 795 aa18.37■□□□□ 0.53
TRAPPC9-210ENST00000521667 TRMT6Q9UJA5 497 aaKnown RBP18.37■□□□□ 0.53
TRAPPC9-210ENST00000521667 APPL1Q9UKG1 709 aa18.37■□□□□ 0.53
TRAPPC9-210ENST00000521667 MYO7AQ13402 2215 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 NEMP1O14524 444 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 GAPDHSO14556 408 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 HERVK_113P63132 956 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 ADIPOR2Q86V24 386 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 STAG3L4Q8TBR4 150 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 GRIN3AQ8TCU5 1115 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 MCUR1Q96AQ8 359 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 SAMD11Q96NU1 681 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 ERVK-6Q9BXR3 956 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 GALPQ9UBC7 116 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 SLCO3A1Q9UIG8 710 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 CDYLQ9Y232 598 aa18.36■□□□□ 0.53
TRAPPC9-210ENST00000521667 DOCK6Q96HP0 2047 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 TMEM233B4DJY2 109 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 SLC9A3R1O14745 358 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 KERAO60938 352 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 POP4O95707 220 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 EPHA3P29320 983 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 PPARGP37231 505 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 PDCD2Q16342 344 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 LSM12Q3MHD2 195 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 DPY19L3Q6ZPD9 716 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 SNX20Q7Z614 316 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 RAB44Q7Z6P3 723 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 CUZD1Q86UP6 607 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 PTGR2Q8N8N7 351 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 SIDT2Q8NBJ9 832 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 CD200R1Q8TD46 325 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 FAR2Q96K12 515 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 PPP1R36Q96LQ0 422 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 SLC30A3Q99726 388 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 CCDC28BQ9BUN5 200 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 OSBPL1AQ9BXW6 950 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 ZDHHC6Q9H6R6 413 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 PIDD1Q9HB75 910 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 IL26Q9NPH9 171 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 PCDHB1Q9Y5F3 818 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 NPIPB15A6NHN6 443 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 TRPC5OSA6NMA1 111 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 E5RI56 91 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 UBXN8O00124 270 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 PRMT5O14744 637 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 DCXO43602 365 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 SUPT7LO94864 414 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 JUNP05412 331 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 MTHFD2P13995 350 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 CHRM3P20309 590 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 ITGALP20701 1170 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 UNC50Q53HI1 259 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 RPS27LQ71UM5 84 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 KIAA0907Q7Z7F0 614 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 SERPINA9Q86WD7 417 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 AHI1Q8N157 1196 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 CBARPQ8N350 705 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 AFAP1L2Q8N4X5 818 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 RBM15BQ8NDT2 890 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 ITFG1Q8TB96 612 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 SCRN2Q96FV2 425 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 ZNF641Q96N77 438 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 SLC2A11Q9BYW1 496 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 ASB8Q9H765 288 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 RNF112Q9ULX5 631 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 PPIL1Q9Y3C6 166 aa18.35■□□□□ 0.53
TRAPPC9-210ENST00000521667 NOTCH4Q99466 2003 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 TRANK1O15050 2925 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 WFS1O76024 890 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 BPIP17213 487 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 MNAT1P51948 309 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 NFATC2Q13469 925 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 UGT3A1Q6NUS8 523 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 CRTC1Q6UUV9 634 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 TPRG1Q6ZUI0 275 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 USP45Q70EL2 814 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 ADGRD2Q7Z7M1 963 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 TSPAN33Q86UF1 283 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 PHTF2Q8N3S3 785 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 NAT16Q8N8M0 369 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 GIMAP7Q8NHV1 300 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 FBXO27Q8NI29 283 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 SMG7Q92540 1137 aaKnown RBP18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 CMTM5Q96DZ9 223 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 TTC1Q99614 292 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 C1orf21Q9H246 121 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 MMADHCQ9H3L0 296 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 IKZF3Q9UKT9 509 aa18.34■□□□□ 0.53
TRAPPC9-210ENST00000521667 GLYATL1P3A0A0U1RQE8 302 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 A8MX80 341 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 TSPAN12O95859 305 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 ZNF7P17097 686 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms