RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 ZNF534Q76KX8 674 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 NLRP9Q7RTR0 991 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 PHYKPLQ8IUZ5 450 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 PPIL6Q8IXY8 311 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 SDR16C5Q8N3Y7 309 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 NAT8LQ8N9F0 302 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 OR13C4Q8NGS5 318 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 KIF18AQ8NI77 898 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 OR1E3Q8WZA6 343 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 GLYATL1Q969I3 302 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 PDXPQ96GD0 296 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 IL22Q9GZX6 179 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 XAB2Q9HCS7 855 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 BFARQ9NZS9 450 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 SPASTQ9UBP0 616 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 KCTD3Q9Y597 815 aa13.68□□□□□ -0.22
CTNNA1-226ENST00000521368 NEMP2A6NFY4 417 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 AGAP14A8MT82 685 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 SMAPO00193 183 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 DNALI1O14645 258 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 INPP4BO15327 924 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 AQP9O43315 295 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 SRP72O76094 671 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 TMEM63AO94886 807 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 SLC25A14O95258 325 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 PRAMEF1O95521 474 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 TNFP01375 233 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 IVDP26440 423 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 XIAPP98170 497 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 ACVR1Q04771 509 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 SEPT6Q14141 434 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 PTPRCAPQ14761 206 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 ELOCQ15369 112 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 CHRNA6Q15825 494 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 SKIDA1Q1XH10 827 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 ATP13A5Q4VNC0 1218 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 ZNF542PQ5EBM4 170 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 PCID2Q5JVF3 399 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 ANKRD22Q5VYY1 191 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 FAM151BQ6UXP7 276 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 MAATS1Q7Z4T9 603 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 HOOK3Q86VS8 718 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 HID1Q8IV36 788 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 NAXDQ8IW45 347 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 RBFAQ8N0V3 343 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 FSTL5Q8N475 847 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 ZNF548Q8NEK5 533 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 PPHLN1Q8NEY8 458 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 ZNF592Q92610 1267 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 TSACCQ96A04 125 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 DNAJC1Q96KC8 554 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 KRT12Q99456 494 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 LRRC61Q9BV99 259 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 RMI1Q9H9A7 625 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 TRIM39Q9HCM9 518 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 FKBPLQ9UIM3 349 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 TCAF1Q9Y4C2 921 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 MRFAP1Q9Y605 127 aa13.67□□□□□ -0.22
CTNNA1-226ENST00000521368 FAM187AA6NFU0 413 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 TPP1O14773 563 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 NDC80O14777 642 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 SCAMP1O15126 338 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 TTI1O43156 1089 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 SH3BP5O60239 455 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 SDC3O75056 442 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 CBFA2T3O75081 653 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 CTSEP14091 401 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 SESN2P58004 480 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 C2orf54Q08AI8 447 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 NFATC2Q13469 925 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 PEX6Q13608 980 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 PUM1Q14671 1186 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 KCTD19Q17RG1 926 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 GPR33Q49SQ1 333 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 PRRT3Q5FWE3 981 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 LDLRAP1Q5SW96 308 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 TSTD2Q5T7W7 516 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 TRIM74Q86UV6 250 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 CAND1Q86VP6 1230 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 GATAD2AQ86YP4 633 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 SLC25A45Q8N413 288 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 DDHD1Q8NEL9 900 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 BAHD1Q8TBE0 780 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 ZNF398Q8TD17 642 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 CDKN2AIPNLQ96HQ2 116 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 DUSP23Q9BVJ7 150 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 TCEAL2Q9H3H9 227 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 SLC32A1Q9H598 525 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 MRM3Q9HC36 420 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 CYP4F12Q9HCS2 524 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 MRPL40Q9NQ50 206 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 TRNAU1APQ9NX07 287 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 NLGN3Q9NZ94 848 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 PCOLCE2Q9UKZ9 415 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 TMPRSS11EQ9UL52 423 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 SUFUQ9UMX1 484 aa13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 OAS3Q9Y6K5 1087 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-226ENST00000521368 PLXNB3Q9ULL4 1909 aa13.65□□□□□ -0.22
CTNNA1-226ENST00000521368 LMO7DNF2Z398 122 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms