RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 MFAP4P55083 255 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 MRPS34P82930 218 aaKnown RBP4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 ECT2LQ008S8 904 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 RUNX1T1Q06455 604 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 KRTAP1-1Q07627 177 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 STK4Q13043 487 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 AIMP2Q13155 320 aaKnown RBP4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 MYBPHQ13203 477 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 OASLQ15646 514 aaKnown RBP4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 PNLIPRP3Q17RR3 467 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 MYLK3Q32MK0 819 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 XKR9Q5GH70 373 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 SATL1Q86VE3 508 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 RPAP2Q8IXW5 612 aaPredicted RBP4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 HM13Q8TCT9 377 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 SLC44A1Q8WWI5 657 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 NEUROG1Q92886 237 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 SMC6Q96SB8 1091 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 ABHD1Q96SE0 405 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 PAFAH2Q99487 392 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 KXD1Q9BQD3 176 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 SF3B5Q9BWJ5 86 aaKnown RBP4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 PPIL3Q9H2H8 161 aaKnown RBP4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 GAREM1Q9H706 876 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 OR14J1Q9UGF5 321 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 SEC63Q9UGP8 760 aaKnown RBP4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 TTC7AQ9ULT0 858 aaPredicted RBP4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 B3GALT5Q9Y2C3 310 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 SNX9Q9Y5X1 595 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 SNX8Q9Y5X2 465 aa4.52□□□□□ -1.69
CTNNA1-222ENST00000520400 A8MV72 311 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 SMAD6O43541 496 aaKnown RBP4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 KCNJ13O60928 360 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 SERPINI2O75830 405 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 WISP2O76076 250 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 PPP1R3DO95685 299 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 GLUD1P00367 558 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 UBA1P22314 1058 aaKnown RBP4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 HOXC9P31274 260 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 EIF2DP41214 584 aaKnown RBP4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 NRIP1P48552 1158 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 GLUD2P49448 558 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 MMP14P50281 582 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 CLDN20P56880 219 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 CSNK2A1P68400 391 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 SREBF2Q12772 1141 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 PLCB4Q15147 1175 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 DECR1Q16698 335 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 RARS2Q5T160 578 aaKnown RBP4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 RHBDF2Q6PJF5 856 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 RAD9BQ6WBX8 426 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 DENND5BQ6ZUT9 1274 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 CEP97Q8IW35 865 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 SCYL3Q8IZE3 742 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 LSMEM1Q8N8F7 131 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 POC5Q8NA72 575 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 CSNK2A3Q8NEV1 391 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 WFIKKN2Q8TEU8 576 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 NSMCE1Q8WV22 266 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 LRRC59Q96AG4 307 aaKnown RBP4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 EPB41L5Q9HCM4 733 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 TSPYL4Q9UJ04 414 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 FBXW11Q9UKB1 542 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 KCNS2Q9ULS6 477 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 PLAGL1Q9UM63 463 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 RABGAP1Q9Y3P9 1069 aa4.51□□□□□ -1.69
CTNNA1-222ENST00000520400 SMARCA4P51532 1647 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 PDS5AQ29RF7 1337 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 B4DLN1 442 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 FAM90A26D6RGX4 464 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 ZNF587BE7ETH6 402 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 SH2B2O14492 632 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 FIBPO43427 364 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 MITFO75030 526 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 TMCC2O75069 709 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 OAZ2O95190 189 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 STARD3NLO95772 234 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 BMP15O95972 392 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 LINC00271P0C7V0 271 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 TRIM21P19474 475 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 SCP2P22307 547 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 TNFRSF8P28908 595 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 CORO1AP31146 461 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 HSD17B4P51659 736 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 MRPL12P52815 198 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 TAS2R38P59533 333 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 MRPS5P82675 430 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 ZNF155Q12901 538 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 GRIK2Q13002 908 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 CTF1Q16619 201 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 KCNT1Q5JUK3 1230 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 KCTD18Q6PI47 426 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 ODF3L1Q8IXM7 274 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 OR8H2Q8N162 312 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 FBXL14Q8N1E6 418 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 CCDC89Q8N998 374 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 OR1J2Q8NGS2 313 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 FAM216AQ8WUB2 273 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 PHF21BQ96EK2 531 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 SAT2Q96F10 170 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms