RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 HLA-DQB2P05538 268 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 FAM228BP0C875 321 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 CES1P23141 567 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 CCNCP24863 283 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 CSTF2P33240 577 aaKnown RBP eCLIP11.69□□□□□ -0.54
POLB-208ENST00000520008 ZNF165P49910 485 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 RAB15P59190 212 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 RPL26P61254 145 aaKnown RBP11.69□□□□□ -0.54
POLB-208ENST00000520008 NIPAL4Q0D2K0 466 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 BIRC2Q13490 618 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 KRT81Q14533 505 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 IFI16Q16666 785 aaKnown RBP11.69□□□□□ -0.54
POLB-208ENST00000520008 ATP13A4Q4VNC1 1196 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 TDRD12Q587J7 1177 aaKnown RBP11.69□□□□□ -0.54
POLB-208ENST00000520008 ANKS6Q68DC2 871 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 TIGD7Q6NT04 549 aaPredicted RBP11.69□□□□□ -0.54
POLB-208ENST00000520008 ZNF761Q86XN6 746 aaPredicted RBP11.69□□□□□ -0.54
POLB-208ENST00000520008 CPNE8Q86YQ8 564 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 CCDC112Q8NEF3 446 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 RTP4Q96DX8 246 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 TEFMQ96QE5 360 aaKnown RBP11.69□□□□□ -0.54
POLB-208ENST00000520008 ZNF670Q9BS34 389 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 SLC39A1Q9NY26 324 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 TBC1D29Q9UFV1 150 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 RPL26L1Q9UNX3 145 aaKnown RBP11.69□□□□□ -0.54
POLB-208ENST00000520008 CHKBQ9Y259 395 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
POLB-208ENST00000520008 BZW2Q9Y6E2 419 aaKnown RBP11.69□□□□□ -0.54
POLB-208ENST00000520008 ZNF106Q9H2Y7 1883 aaKnown RBP11.68□□□□□ -0.54
POLB-208ENST00000520008 EFCAB7A8K855 629 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 ARHGAP6O43182 974 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 RAD1O60671 282 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 MAP3K6O95382 1288 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 ATP1A1P05023 1023 aaKnown RBP11.68□□□□□ -0.54
POLB-208ENST00000520008 MMP2P08253 660 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 SPINT3P49223 89 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 EPHB1P54762 984 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 EPHA4P54764 986 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 HHEXQ03014 270 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 ITKQ08881 620 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 ANKRD20A8PQ5CZ79 823 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 DCAF12Q5T6F0 453 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 BORAQ6PGQ7 559 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 IYDQ6PHW0 289 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 CHST15Q7LFX5 561 aaPredicted RBP11.68□□□□□ -0.54
POLB-208ENST00000520008 CACNA2D3Q8IZS8 1091 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 IL22RA1Q8N6P7 574 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 PQLC3Q8N755 202 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 OR10G6Q8NH81 332 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 EID2BQ96D98 161 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 HDAC11Q96DB2 347 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 SLC45A3Q96JT2 553 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 SLC38A3Q99624 504 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 HERPUD2Q9BSE4 406 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 RMI1Q9H9A7 625 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 PCDH9Q9HC56 1237 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 RBM22Q9NW64 420 aaKnown RBP eCLIP11.68□□□□□ -0.54
POLB-208ENST00000520008 TUBD1Q9UJT1 453 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 PRKAB1Q9Y478 270 aa11.68□□□□□ -0.54
POLB-208ENST00000520008 MN1Q10571 1320 aaPredicted RBP11.67□□□□□ -0.54
POLB-208ENST00000520008 TRBV23OR9-2A0A075B6M9 112 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 MYO1FO00160 1098 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 SERPING1P05155 500 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 F3P13726 295 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 ANP32AP39687 249 aaKnown RBP11.67□□□□□ -0.54
POLB-208ENST00000520008 POLE2P56282 527 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 TAS2R40P59535 323 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 MC2RQ01718 297 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 GBE1Q04446 702 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 SLC10A2Q12908 348 aaPredicted RBP11.67□□□□□ -0.54
POLB-208ENST00000520008 PDK2Q15119 407 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 QPCTQ16769 361 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 CCDC122Q5T0U0 273 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 ALKBH5Q6P6C2 394 aaKnown RBP11.67□□□□□ -0.54
POLB-208ENST00000520008 TIPARPQ7Z3E1 657 aaKnown RBP11.67□□□□□ -0.54
POLB-208ENST00000520008 FAM129CQ86XR2 697 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 LPCAT1Q8NF37 534 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 ZNF564Q8TBZ8 553 aaPredicted RBP11.67□□□□□ -0.54
POLB-208ENST00000520008 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 FBXO8Q9NRD0 319 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 SIDT1Q9NXL6 827 aaKnown RBP11.67□□□□□ -0.54
POLB-208ENST00000520008 DTLQ9NZJ0 730 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 TMEM184BQ9Y519 407 aaPredicted RBP11.67□□□□□ -0.54
POLB-208ENST00000520008 FLNCQ14315 2725 aa11.67□□□□□ -0.54
POLB-208ENST00000520008 KIR2DS5A0A0G2JLQ3 304 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 A0A0G2JNG1 304 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 C1orf232A0A0U1RR37 186 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 RGSL1A5PLK6 1076 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 LILRA5A6NI73 299 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 PRR19A6NJB7 356 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 ZNF891A8MT65 544 aaPredicted RBP11.66□□□□□ -0.54
POLB-208ENST00000520008 ANKRD66B4E2M5 251 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 KIR2DS3K7RE56 304 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 CAPN5O15484 640 aaPredicted RBP11.66□□□□□ -0.54
POLB-208ENST00000520008 NUAK1O60285 661 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 PROSCO94903 275 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 ASMTLO95671 621 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 DLGAP3O95886 979 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 SERPINC1P01008 464 aa11.66□□□□□ -0.54
POLB-208ENST00000520008 ANKRD34CP0C6C1 535 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms