RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 GCNT3O95395 438 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 PGK1P00558 417 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 RPN1P04843 607 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 SP1P08047 785 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 CCDC172P0C7W6 258 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 STAG3L1P0CL83 205 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 SMIM10L2AP0DMW4 78 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 SMIM10L2BP0DMW5 78 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 ARP10275 920 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 EPB41P11171 864 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 MYF5P13349 255 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 KRT13P13646 458 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 P4HA1P13674 534 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 DESP17661 470 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 DRD1P21728 446 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 MARK3P27448 753 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 THPOP40225 353 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 NAMPTP43490 491 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 LIG4P49917 911 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 CLCN5P51795 746 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 NDUFA8P51970 172 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 CRYBB1P53674 252 aaPredicted RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 SNX16P57768 344 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 FKBP3Q00688 224 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 LRRC63Q05C16 580 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 ENPEPQ07075 957 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 ARHGAP1Q07960 439 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 ST3GAL1Q11201 340 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 TRAF2Q12933 501 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 ITGB3BPQ13352 177 aaPredicted RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 PPIGQ13427 754 aaKnown RBP eCLIP1.96□□□□□ -2.11e-7■■■□□ 15.8
CCNC-208ENST00000519617 PRPF4BQ13523 1007 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 PIN1Q13526 163 aaPredicted RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 PKP1Q13835 747 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 CTTNQ14247 550 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 GPR18Q14330 331 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 RBM39Q14498 530 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 EMC2Q15006 297 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 KARSQ15046 597 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 PTGISQ16647 500 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 EDRF1Q3B7T1 1238 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 DCAF4L1Q3SXM0 396 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 HSDL1Q3SXM5 330 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 COBLL1Q53SF7 1204 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 TDRD12Q587J7 1177 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 TMEM196Q5HYL7 178 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 DNTTIP2Q5QJE6 756 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 FNBP1LQ5T0N5 605 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 ZNF658Q5TYW1 1059 aaPredicted RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 OTUD1Q5VV17 481 aaPredicted RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 ABLIM2Q6H8Q1 611 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 RINT1Q6NUQ1 792 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 CAVIN1Q6NZI2 390 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 ARMCX5Q6P1M9 558 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 NOTUMQ6P988 496 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 TLDC1Q6P9B6 456 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 CREB3L2Q70SY1 520 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 RASGRP2Q7LDG7 609 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 ANKRD33Q7Z3H0 272 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 KDELC2Q7Z4H8 507 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 RPAINQ86UA6 219 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 GPBP1Q86WP2 473 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 CATSPER3Q86XQ3 398 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 MYOCDQ8IZQ8 938 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 CADM3Q8N126 398 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 TXLNBQ8N3L3 684 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 GUF1Q8N442 669 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 PAQR4Q8N4S7 273 aaPredicted RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 TTC39CQ8N584 583 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 C4orf32Q8N8J7 132 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 U2AF1L4Q8WU68 220 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 ADAMTS14Q8WXS8 1223 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 SEPT8Q92599 483 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 PMM1Q92871 262 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 PAGE5Q96GU1 130 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 APIPQ96GX9 242 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 EPSTI1Q96J88 318 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 ZNF333Q96JL9 665 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 SNX22Q96L94 193 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 GPR78Q96P69 363 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 DEFB118Q96PH6 123 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 DUX5Q96PT3 197 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 FNBP1Q96RU3 617 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 ZNF347Q96SE7 839 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 CCDC94Q9BW85 323 aaPredicted RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 MRPL9Q9BYD2 267 aaKnown RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 SPRY4Q9C004 299 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 MAGEH1Q9H213 219 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 UNC45AQ9H3U1 944 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 TSPY26PQ9H489 355 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 CLSTN2Q9H4D0 955 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 ST6GALNAC4Q9H4F1 302 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 FAM124BQ9H5Z6 455 aaPredicted RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 ZBTB26Q9HCK0 441 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 OLFML3Q9NRN5 406 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 C1orf112Q9NSG2 853 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 SLC38A7Q9NVC3 462 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 PANK4Q9NVE7 773 aa1.96□□□□□ -2.1
CCNC-208ENST00000519617 SUCLA2Q9P2R7 463 aaPredicted RBP1.96□□□□□ -2.1
CCNC-208ENST00000519617 ZNF180Q9UJW8 692 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms