RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 RALGPS2Q86X27 583 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 MINDY1Q8N5J2 469 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 CDYL2Q8N8U2 506 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 MCOLN3Q8TDD5 553 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 HDAC2Q92769 488 aaKnown RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 COPS5Q92905 334 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 AURKBQ96GD4 344 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 HIST1H2AHQ96KK5 128 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 PPM1MQ96MI6 270 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 RPRD1AQ96P16 312 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 HIST1H2AJQ99878 128 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 H2AFJQ9BTM1 129 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 NFKBIZQ9BYH8 718 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 NUAK2Q9H093 628 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 REEP1Q9H902 201 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ABCC13Q9NSE7 274 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 DKK3Q9UBP4 350 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 FAM50BQ9Y247 325 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 PPP2R3BQ9Y5P8 575 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 FAM234BA2RU67 622 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 LRIG2O94898 1065 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 DBTP11182 482 aaKnown RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 HSD17B1P14061 328 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF26P17031 533 aaPredicted RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 CD53P19397 219 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 PCSK6P29122 969 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 GMPRP36959 345 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ARPP19P56211 112 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 OLIG2Q13516 323 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 LCN8Q6JVE9 175 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 SENP8Q96LD8 212 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 POLR1EQ9GZS1 481 aaKnown RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 KAT8Q9H7Z6 458 aaKnown RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ANKHQ9HCJ1 492 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ZNHIT2Q9UHR6 403 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ERGIC3Q9Y282 383 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 B3GNT3Q9Y2A9 372 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ZCWPW2A0A1B0GU75 182 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 A0A1W2PP18 115 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 C7orf72A4D263 438 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 CENPXA8MT69 81 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 FOXD2O60548 495 aaPredicted RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 RAMP2O60895 175 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 SEC22BO75396 215 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 CCNKO75909 580 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 RSL1D1O76021 490 aaKnown RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 CLIC3O95833 236 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 MT-CYBP00156 380 aaPredicted RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 THP07101 528 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 HSMCR30P0CW71 290 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 MBL2P11226 248 aaPredicted RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 S100A3P33764 101 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF33AQ06730 810 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 PGS1Q32NB8 556 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 TTLL9Q3SXZ7 439 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 SCIMPQ6UWF3 145 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 FAM35AQ86V20 835 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 HID1Q8IV36 788 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 PMM1Q92871 262 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 C12orf42Q96LP6 360 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ARMC7Q9H6L4 198 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 MRM3Q9HC36 420 aaKnown RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 RPS6KA6Q9UK32 745 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 HES2Q9Y543 173 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 STRCP1A6NGW2 1772 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 HMX2A2RU54 273 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 TOR1BO14657 336 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 DYNC1LI2O43237 492 aaPredicted RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 RGS20O76081 388 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 DPEP1P16444 411 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 IGFBP5P24593 272 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 PFKPQ01813 784 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 GALNT2Q10471 571 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 MAP2K5Q13163 448 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 CRY1Q16526 586 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ATG14Q6ZNE5 492 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 C2CD4AQ8NCU7 369 aaPredicted RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 TMBIM1Q969X1 311 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 BIRC7Q96CA5 298 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 SNX27Q96L92 541 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 RANBP9Q96S59 729 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 MLPHQ9BV36 600 aaPredicted RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 SEZ6LQ9BYH1 1024 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 SLC25A51Q9H1U9 297 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 TMEM181Q9P2C4 612 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 AFF4Q9UHB7 1163 aaKnown RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ENOPH1Q9UHY7 261 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF221Q9UK13 617 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 WBP11Q9Y2W2 641 aaKnown RBP6.63□□□□□ -1.35
CPNE3-203ENST00000517490 CNTNAP1P78357 1384 aa6.63□□□□□ -1.35
CPNE3-203ENST00000517490 ELOVL7A1L3X0 281 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 HTR3EA5X5Y0 456 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 H3BMM5 538 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ACOT8O14734 319 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 NPPAP01160 153 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 FGF1P05230 155 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 RFC2P35250 354 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 GSSP48637 474 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 OXCT1P55809 520 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ADAM17P78536 824 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms