RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 MMTAG2Q9BU76 263 aaKnown RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 NUP85Q9BW27 656 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 PIGMQ9H3S5 423 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 OPA3Q9H6K4 179 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 PDGFCQ9NRA1 345 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 SIRT3Q9NTG7 399 aaPredicted RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 ACSS1Q9NUB1 689 aaPredicted RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 LARSQ9P2J5 1176 aaKnown RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 GAGE2DQ9UEU5 116 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 OR14J1Q9UGF5 321 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 LIPT1Q9Y234 373 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 SRPRBQ9Y5M8 271 aaKnown RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 EDDM13A0A1B0GTR0 161 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 BICDL2A1A5D9 508 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 GOLGA6L9A6NEM1 432 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 LDB2O43679 373 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 RSL1D1O76021 490 aaKnown RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 TOMM70O94826 608 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 DDNO94850 711 aaPredicted RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 CBSLP0DN79 551 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 TGFB3P10600 412 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 C6P13671 934 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 FDPSP14324 419 aaKnown RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 MC5RP33032 325 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 CBSP35520 551 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 ACVRL1P37023 503 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 CCR10P46092 362 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 ZP1P60852 638 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 TMF1P82094 1093 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 GRSF1Q12849 480 aaKnown RBP eCLIP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 ZNF273Q14593 569 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 PTPRCAPQ14761 206 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 NR1D2Q14995 579 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 SNAPC1Q16533 368 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 ZNF284Q2VY69 593 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 MMEL1Q495T6 779 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 ATP13A5Q4VNC0 1218 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 RAB6CQ53S08 254 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 C10orf25Q5T742 122 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 SIGIRRQ6IA17 410 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 MIS18BP1Q6P0N0 1132 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 FAM198BQ6UWH4 519 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 MFSD6Q6ZSS7 791 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 FAM47EQ6ZV65 393 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 INTS8Q75QN2 995 aaKnown RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 DNAJB7Q7Z6W7 309 aaPredicted RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 SDCCAG8Q86SQ7 713 aaPredicted RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 IQCHQ86VS3 1027 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 ARHGEF25Q86VW2 580 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 SNX32Q86XE0 403 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 AFAP1Q8N556 730 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 BOLLQ8N9W6 283 aaKnown RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 GDAP1Q8TB36 358 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 ARRDC2Q8TBH0 407 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 GPT2Q8TD30 523 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 ATL1Q8WXF7 558 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 MR1Q95460 341 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 TAAR8Q969N4 342 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 PTERQ96BW5 349 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 GBP5Q96PP8 586 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 TRMOQ9BU70 441 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 ABHD6Q9BV23 337 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 MRPL9Q9BYD2 267 aaKnown RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 PRSS22Q9GZN4 317 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 RAB6CQ9H0N0 254 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 AAMDCQ9H7C9 122 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 NOL11Q9H8H0 719 aaKnown RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 GRPEL1Q9HAV7 217 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 GPR108Q9NPR9 543 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 STK39Q9UEW8 545 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 TSPYL4Q9UJ04 414 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 LEF1Q9UJU2 399 aaPredicted RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 R3HDM2Q9Y2K5 976 aaKnown RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 DMRT1Q9Y5R6 373 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 COX11Q9Y6N1 276 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 RPGRIP1LQ68CZ1 1315 aa3.33□□□□□ -1.88
RNU6-840P-201ENST00000517275 SMIM35A0A1B0GVV1 85 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 ANXA2P2A6NMY6 339 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 KDM4EB2RXH2 506 aaPredicted RBP3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 NDUFS4O43181 175 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 SPRY1O43609 319 aaPredicted RBP3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 PRAMEF11O60813 436 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 EPN2O95208 641 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 TGDSO95455 350 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 TRUB2O95900 331 aaKnown RBP3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 ATP5BP06576 529 aaKnown RBP3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 FGF2P09038 288 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 DANCRP0C864 163 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 CHRNB1P11230 501 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 ATP6V1B1P15313 513 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 UGT1A1P22309 533 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 APOBEC1P41238 236 aaKnown RBP3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 ALDH7A1P49419 539 aaKnown RBP3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 NAGLUP54802 743 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 CSNK2A1P68400 391 aaPredicted RBP3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 SCN1BQ07699 218 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 RALGDSQ12967 914 aa3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 MAD2L1Q13257 205 aaPredicted RBP3.32□□□□□ -1.88
RNU6-840P-201ENST00000517275 MTX1Q13505 466 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms