RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 RBMY1A1P0DJD3 496 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 RBMY1CP0DJD4 496 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 MSH3P20585 1137 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 NTSR1P30989 418 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 CYP2J2P51589 502 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 CCR5P51681 352 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SLC37A1P57057 533 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 GNB2P62879 340 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 CHAF1AQ13111 956 aaPredicted RBP-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 PKP1Q13835 747 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 TIMM50Q3ZCQ8 353 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 TOR2AQ5JU69 321 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 LY6G6FQ5SQ64 297 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 CDCA2Q69YH5 1023 aaPredicted RBP-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 FAM71E1Q6IPT2 247 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 LCN10Q6JVE6 187 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SPATA8Q6RVD6 105 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 LRRC8DQ7L1W4 858 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SLC16A9Q7RTY1 509 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 KCNK18Q7Z418 384 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SERPINA11Q86U17 422 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 RASSF3Q86WH2 238 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 FAM131BQ86XD5 332 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 UBQLNLQ8IYU4 475 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 METTL4Q8N3J2 472 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF525Q8N782 197 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 CELF2-AS1Q8N7Q2 184 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 KIAA0895Q8NCT3 520 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 OR52L2PQ8NGH6 319 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 TBC1D22AQ8WUA7 517 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SNRNP27Q8WVK2 155 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 RAPGEF4Q8WZA2 1011 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SUSD6Q92537 303 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 HDAC10Q969S8 669 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 NEUROD6Q96NK8 337 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 GPR101Q96P66 508 aaPredicted RBP-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 FEZ1Q99689 392 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 NEURL2Q9BR09 285 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 RIOK1Q9BRS2 568 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 RHNO1Q9BSD3 238 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 PI4K2AQ9BTU6 479 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 KRTAP2-4Q9BYR9 128 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 KRTAP2-1Q9BYU5 128 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 GPN1Q9HCN4 374 aaPredicted RBP-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 NMRK2Q9NPI5 230 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 ECHDC1Q9NTX5 307 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SPTLC3Q9NUV7 552 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SAP30BPQ9UHR5 308 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 HERC5Q9UII4 1024 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SERPINA10Q9UK55 444 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 TPCN1Q9ULQ1 816 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 CDY1Q9Y6F8 540 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 CUL9Q8IWT3 2517 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 TARSL2A2RTX5 802 aaKnown RBP-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 K7N7A8 449 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNHIT1O43257 154 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 ICOSLGO75144 302 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 OSMP13725 252 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 LIFP15018 202 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 RBL1P28749 1068 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 DCTDP32321 178 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 STX2P32856 288 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 GGT5P36269 586 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 IER3P46695 156 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 HNRNPH2P55795 449 aaKnown RBP-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF234Q14588 700 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 IL11RAQ14626 422 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 STAT4Q14765 748 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 CLCA4Q14CN2 919 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 IL17AQ16552 155 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 PRICKLE4Q2TBC4 344 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 CFAP100Q494V2 611 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 TOR1AIP1Q5JTV8 583 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 LINC00242Q5T6M2 205 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 RGMBQ6NW40 437 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 ERAP2Q6P179 960 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 PGBD2Q6P3X8 592 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 CRTC1Q6UUV9 634 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 PIWIL3Q7Z3Z3 882 aaKnown RBP-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 PTAR1Q7Z6K3 402 aaPredicted RBP-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 C11orf74Q86VG3 221 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 HOGA1Q86XE5 327 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 TMTC1Q8IUR5 882 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 MTURNQ8N3F0 131 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 TMEM217Q8N7C4 229 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 LINC01555Q8NAE3 123 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 OR2T11Q8NH01 316 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 ARRDC2Q8TBH0 407 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF669Q96BR6 464 aaPredicted RBP-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 SPATA17Q96L03 361 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 FOPNLQ96NB1 174 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 C8orf37Q96NL8 207 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 HIST1H2AAQ96QV6 131 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 ATF6BQ99941 703 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 TDRD1Q9BXT4 1180 aaKnown RBP-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 LRRCC1Q9C099 1032 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 ACAD9Q9H845 621 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 TOPORSQ9NS56 1045 aaPredicted RBP-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 SLC2A8Q9NY64 477 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 THAP10Q9P2Z0 257 aaPredicted RBP-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms