RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 NNMTP40261 264 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 UBA7P41226 1012 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 NLRP5P59047 1200 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 UFM1P61960 85 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 POU3F1Q03052 451 aaPredicted RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 GRSF1Q12849 480 aaKnown RBP eCLIP3.24□□□□□ -1.89
HERC4-215ENST00000515753 DLG1Q12959 904 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 GRIK3Q13003 919 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 MYBPHQ13203 477 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 RASA2Q15283 850 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 OASLQ15646 514 aaKnown RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 KRT24Q2M2I5 525 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 DUSP28Q4G0W2 176 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 ATP13A5Q4VNC0 1218 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 SGO1Q5FBB7 561 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 XKR9Q5GH70 373 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 CES5AQ6NT32 575 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 SLC22A25Q6T423 547 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 MTSS1LQ765P7 747 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 SZRD1Q7Z422 152 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 RFLNBQ8N5W9 214 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 METTL6Q8TCB7 284 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 MAGEC3Q8TD91 643 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 ERGIC1Q969X5 290 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 ATP6V1E2Q96A05 226 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 KLHL29Q96CT2 875 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 CALML4Q96GE6 196 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 SIN3AQ96ST3 1273 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 H2AFJQ9BTM1 129 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 SPRY4Q9C004 299 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 RANBP17Q9H2T7 1088 aaKnown RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 RETREG1Q9H6L5 497 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 C17orf75Q9HAS0 396 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 MKKSQ9NPJ1 570 aaPredicted RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 SEPT11Q9NVA2 429 aaKnown RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 HCFC1R1Q9NWW0 138 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 OCIAD1Q9NX40 245 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 CISD1Q9NZ45 108 aaKnown RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 SMARCAL1Q9NZC9 954 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 MORF4L1Q9UBU8 362 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 RPS6KA6Q9UK32 745 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 ZHX1Q9UKY1 873 aaPredicted RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 A4GNTQ9UNA3 340 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 CAMK2AQ9UQM7 478 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 NAALADL1Q9UQQ1 740 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 ZNF711Q9Y462 761 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 PSAT1Q9Y617 370 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 STON1Q9Y6Q2 735 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 PTPRTO14522 1441 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 CLIP1P30622 1438 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 UHRF1BP1Q6BDS2 1440 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 CNTLNQ9NXG0 1405 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 PCF11O94913 1555 aaKnown RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 EFCAB5A4FU69 1503 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 TEX13CA0A0J9YWL9 993 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 GOLGA6L9A6NEM1 432 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 TSPY2A6NKD2 308 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 TTC36A6NLP5 189 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 VILLO15195 856 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 TOM1O60784 492 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 NDUFS7O75251 213 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 LINC00271P0C7V0 271 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 TSPY3P0CV98 308 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 TSPY8P0CW00 308 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 CDH2P19022 906 aaPredicted RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 TAF1P21675 1872 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 TM4SF1P30408 202 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 ABCD1P33897 745 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 SHMT1P34896 483 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 GGT5P36269 586 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 SNX16P57768 344 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 RPS3AP61247 264 aaKnown RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 RPL7AP62424 266 aaKnown RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 IFI35P80217 286 aaPredicted RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 PLIN5Q00G26 463 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 TSPY1Q01534 308 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 STK4Q13043 487 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 NEDD9Q14511 834 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 VEPH1Q14D04 833 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 ZRSR1Q15695 479 aaKnown RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 C9orf84Q5VXU9 1444 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 GPR139Q6DWJ6 353 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 NAA16Q6N069 864 aaPredicted RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 RPUSD3Q6P087 351 aaKnown RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 NOXA1Q86UR1 476 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 ZC3HC1Q86WB0 502 aaKnown RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 VSIG1Q86XK7 387 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 DHX40Q8IX18 779 aaKnown RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 SLC35F3Q8IY50 421 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 TAGAPQ8N103 731 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 NAGSQ8N159 534 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 PGBD5Q8N414 524 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 AFAP1Q8N556 730 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 TTC39CQ8N584 583 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 SRBD1Q8N5C6 995 aaKnown RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 VMP1Q96GC9 406 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 SCMH1Q96GD3 660 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 HES6Q96HZ4 224 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 IGSF21Q96ID5 467 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms