RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 VPS33AQ96AX1 596 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 ZYG11BQ9C0D3 744 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 MUC13Q9H3R2 512 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 TMEM248Q9NWD8 314 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 SMPD3Q9NY59 655 aaPredicted RBP16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 TRPV2Q9Y5S1 764 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 DOCK3Q8IZD9 2030 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 SH3PXD2BA1X283 911 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 CCDC162PA2VCL2 907 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 ASPDHA6ND91 283 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 CTSHP09668 335 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 EEF1DP29692 281 aaKnown RBP16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 CAPGP40121 348 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 SFSWAPQ12872 951 aaKnown RBP16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 ILF2Q12905 390 aaKnown RBP16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 RCAN2Q14206 197 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 CYBRD1Q53TN4 286 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 OGFOD2Q6N063 350 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 MSANTD2Q6P1R3 559 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 ELMSAN1Q6PJG2 1045 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 PATL1Q86TB9 770 aaKnown RBP16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 SPATA2LQ8IUW3 424 aaPredicted RBP16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 BLOC1S5Q8TDH9 187 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 TSPEARQ8WU66 669 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 SLC39A13Q96H72 371 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 TEX37Q96LM6 180 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 TLR6Q9Y2C9 796 aa16.74■□□□□ 0.27
TSPAN17-209ENST00000515708 TMX2-CTNND1H3BSU7 103 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 VPS4BO75351 444 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 GJB3O75712 270 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 ATE1O95260 518 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 NCK1P16333 377 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 ECT2LQ008S8 904 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 LIPEQ05469 1076 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 C16orf72Q14CZ0 275 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 DHRSXQ8N5I4 330 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 ZNF420Q8TAQ5 688 aaPredicted RBP16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 RSPH1Q8WYR4 309 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 KCTD14Q9BQ13 255 aaPredicted RBP16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 SEZ6LQ9BYH1 1024 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 AP5M1Q9H0R1 490 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 SEMA4BQ9NPR2 832 aaPredicted RBP16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 H3BMQ9 156 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 SNAP91O60641 907 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 BAIAP3O94812 1187 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 CYBBP04839 570 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 ITGB1P05556 798 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 PRR35P0CG20 571 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 TTKP33981 857 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 RPS9P46781 194 aaKnown RBP16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 ZFP36L2P47974 494 aaKnown RBP16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 KCNK10P57789 538 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 PURAQ00577 322 aaKnown RBP16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 TNK2Q07912 1038 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 RAB39AQ14964 217 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 FBXO48Q5FWF7 155 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 MS4A13Q5J8X5 152 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 COLGALT2Q8IYK4 626 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 THEM5Q8N1Q8 247 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 PAPD5Q8NDF8 572 aaKnown RBP16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 OR13C4Q8NGS5 318 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 PEX13Q92968 403 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 KIAA1191Q96A73 305 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 PPP1R14BQ96C90 147 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 COG8Q96MW5 612 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 DOK1Q99704 481 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 AARSD1Q9BTE6 412 aaKnown RBP16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 RPF2Q9H7B2 306 aaKnown RBP16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 ANAPC2Q9UJX6 822 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 CLEC11AQ9Y240 323 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 TIMM22Q9Y584 194 aa16.73■□□□□ 0.27
TSPAN17-209ENST00000515708 SUPT3HB4E1H0 165 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 KERAO60938 352 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 SUPT3HO75486 399 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 CRCPO75575 148 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 RPP40O75818 363 aaKnown RBP16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 DCKP27707 260 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 STC1P52823 247 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 CACNB2Q08289 660 aaPredicted RBP16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 IRF5Q13568 498 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 PAGE3Q5JUK9 113 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 SPATA19Q7Z5L4 167 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 MRPL10Q7Z7H8 261 aaKnown RBP16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 KIAA2013Q8IYS2 634 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 TBC1D21Q8IYX1 336 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 FBXO39Q8N4B4 442 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 MAGEE2Q8TD90 523 aaPredicted RBP16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 SEMA3CQ99985 751 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 POLR1BQ9H9Y6 1135 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 CATSPERZQ9NTU4 200 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 INTS10Q9NVR2 710 aaKnown RBP16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 AIG1Q9NVV5 245 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 GIPC1O14908 333 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 EEDO75530 441 aaKnown RBP16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 SOX11P35716 441 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 FUT11Q495W5 492 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 GPR107Q5VW38 600 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 SCN4BQ8IWT1 228 aa16.72■□□□□ 0.27
TSPAN17-209ENST00000515708 CPNE9Q8IYJ1 553 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms