RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 RDH11Q8TC12 318 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 RAB2BQ8WUD1 216 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 STYXQ8WUJ0 223 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 FIG4Q92562 907 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 LPPQ93052 612 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 NSMCE2Q96MF7 247 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 BDH2Q9BUT1 245 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 GBA3Q9H227 469 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 ST3GAL5Q9UNP4 418 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 CPQQ9Y646 472 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 TCRBV3S1A0A5B6 114 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 SEC24AO95486 1093 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 PGK1P00558 417 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 IGFBP6P24592 240 aaPredicted RBP9.61□□□□□ -0.87
VCAN-210ENST00000513960 IDUAP35475 653 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 ZNF135P52742 658 aaPredicted RBP9.61□□□□□ -0.87
VCAN-210ENST00000513960 SPCS2Q15005 226 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 CCL14Q16627 93 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 TIGD2Q4W5G0 525 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 DHRS4L2Q6PKH6 230 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 SPESP1Q6UW49 350 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 GPRIN1Q7Z2K8 1008 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 TMEM135Q86UB9 458 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 CADM3Q8N126 398 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 FAR2Q96K12 515 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 SLC2A6Q9UGQ3 507 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 PTBP2Q9UKA9 531 aaKnown RBP9.61□□□□□ -0.87
VCAN-210ENST00000513960 CRYL1Q9Y2S2 319 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 ZCWPW2A0A1B0GU75 182 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 SLC22A2O15244 555 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 FCGR1AP12314 374 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 CPB1P15086 417 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 CLK1P49759 484 aaKnown RBP9.61□□□□□ -0.87
VCAN-210ENST00000513960 FKBP1BP68106 108 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 MRPS6P82932 125 aaKnown RBP9.61□□□□□ -0.87
VCAN-210ENST00000513960 LIPEQ05469 1076 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 TRIM32Q13049 653 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 RBM20Q5T481 1227 aaKnown RBP9.61□□□□□ -0.87
VCAN-210ENST00000513960 NPWQ8N729 165 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 C19orf60Q96EN9 201 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 ZFYVE19Q96K21 471 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 MRPL57Q9BQC6 102 aaKnown RBP9.61□□□□□ -0.87
VCAN-210ENST00000513960 CHID1Q9BWS9 393 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 CASS4Q9NQ75 786 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 CCM2LQ9NUG4 571 aaPredicted RBP9.61□□□□□ -0.87
VCAN-210ENST00000513960 FLRT1Q9NZU1 646 aa9.61□□□□□ -0.87
VCAN-210ENST00000513960 EVLQ9UI08 416 aaPredicted RBP9.61□□□□□ -0.87
VCAN-210ENST00000513960 SNPHO15079 494 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 LRIG2O94898 1065 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 CELF2O95319 508 aaKnown RBP9.6□□□□□ -0.87
VCAN-210ENST00000513960 CYP4B1P13584 511 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 PAMP19021 973 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 KCNA5P22460 613 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 DCKP27707 260 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 SCNN1GP51170 649 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 IST1P53990 364 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 RAB15P59190 212 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 COPZ1P61923 177 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 IRF5Q13568 498 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 LAPTM5Q13571 262 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 AKAP14Q86UN6 197 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 CENPLQ8N0S6 344 aaPredicted RBP9.6□□□□□ -0.87
VCAN-210ENST00000513960 ZFP90Q8TF47 636 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 OSCP1Q8WVF1 389 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 NACA2Q9H009 215 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 LTB4R2Q9NPC1 389 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 USP22Q9UPT9 525 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 ORC6Q9Y5N6 252 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 TRPV2Q9Y5S1 764 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 H0YJX3 145 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 PSMD3O43242 534 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 TBX1O43435 398 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 B3GAT3O94766 335 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 SIX3O95343 332 aaPredicted RBP9.6□□□□□ -0.87
VCAN-210ENST00000513960 BMP2P12643 396 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 POLR2IP36954 125 aaKnown RBP9.6□□□□□ -0.87
VCAN-210ENST00000513960 ECT2LQ008S8 904 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 SEMA3BQ13214 749 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 PAN2Q504Q3 1202 aaKnown RBP9.6□□□□□ -0.87
VCAN-210ENST00000513960 GNASQ5JWF2 1037 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 LINC00523Q86TU6 105 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 ZMIZ2Q8NF64 920 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 TEKT5Q96M29 485 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 KCNA7Q96RP8 456 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 OLFM1Q99784 485 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 TBCDQ9BTW9 1192 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 CEP44Q9C0F1 390 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 ALG2Q9H553 416 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 SEMA4BQ9NPR2 832 aaPredicted RBP9.6□□□□□ -0.87
VCAN-210ENST00000513960 TIMM22Q9Y584 194 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 A8MT66 165 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 IPO13O94829 963 aaKnown RBP9.6□□□□□ -0.87
VCAN-210ENST00000513960 CHEK2O96017 543 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 ODC1P11926 461 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 ALOX12P18054 663 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 SLC1A2P43004 574 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 APLP1P51693 650 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 VBP1P61758 197 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 DAB2P98082 770 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 CHRNB3Q05901 458 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms