RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 RCBTB1Q8NDN9 531 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 ZNF564Q8TBZ8 553 aaPredicted RBP12.48□□□□□ -0.41
VEGFA-216ENST00000512683 HTR3CQ8WXA8 447 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 KIAA1143Q96AT1 154 aaPredicted RBP12.48□□□□□ -0.41
VEGFA-216ENST00000512683 UCK1Q9HA47 277 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 PCDH18Q9HCL0 1135 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 GOLGA6AQ9NYA3 693 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 ANAPC2Q9UJX6 822 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 PILRAQ9UKJ1 303 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 HECTD1Q9ULT8 2610 aa12.48□□□□□ -0.41
VEGFA-216ENST00000512683 TTC24A2A3L6 582 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-216ENST00000512683 GPR89AB7ZAQ6 455 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 RAD1O60671 282 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 PDHA1P08559 390 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 GPR89BP0CG08 455 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 MX2P20592 715 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 PTMSP20962 102 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 GARSP41250 739 aaKnown RBP12.47□□□□□ -0.41
VEGFA-216ENST00000512683 NOP2P46087 812 aaKnown RBP12.47□□□□□ -0.41
VEGFA-216ENST00000512683 ARSEP51690 589 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 MAXP61244 160 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 ITKQ08881 620 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 GALNT2Q10471 571 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 KCNAB2Q13303 367 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 MAP7Q14244 749 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 CLCA4Q14CN2 919 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 PAFAH1B3Q15102 231 aaKnown RBP12.47□□□□□ -0.41
VEGFA-216ENST00000512683 PDK2Q15119 407 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 IFI16Q16666 785 aaKnown RBP12.47□□□□□ -0.41
VEGFA-216ENST00000512683 NKAIN2Q5VXU1 208 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 LYSMD3Q7Z3D4 306 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 CPNE8Q86YQ8 564 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 PLXDC1Q8IUK5 500 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 NLGN4XQ8N0W4 816 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 BMPERQ8N8U9 685 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 NLGN4YQ8NFZ3 816 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-216ENST00000512683 CCHCR1Q8TD31 782 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 SCAMP4Q969E2 229 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 FAM83DQ9H4H8 585 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 NT5MQ9NPB1 228 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 TMEM98Q9Y2Y6 226 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 TMEM184BQ9Y519 407 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-216ENST00000512683 UNC13CQ8NB66 2214 aa12.47□□□□□ -0.41
VEGFA-216ENST00000512683 KIF26BQ2KJY2 2108 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 ARHGEF17Q96PE2 2063 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-216ENST00000512683 EFCAB7A8K855 629 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 TOX3O15405 576 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-216ENST00000512683 DNAJC6O75061 913 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 ASMTLO95671 621 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 RECKO95980 971 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 CD48P09326 243 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 LIFP15018 202 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 CTPS1P17812 591 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 CYP4F2P78329 520 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 HHEXQ03014 270 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 MMRN1Q13201 1228 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 KRT81Q14533 505 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 ASTE1Q2TB18 679 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-216ENST00000512683 ATP13A4Q4VNC1 1196 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 ANKRD20A8PQ5CZ79 823 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 SLC37A2Q8TED4 501 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 PATE1Q8WXA2 126 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 RTP4Q96DX8 246 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 SRPK1Q96SB4 655 aaKnown RBP12.46□□□□□ -0.41
VEGFA-216ENST00000512683 DNAJC7Q99615 494 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 RIOK2Q9BVS4 552 aaKnown RBP12.46□□□□□ -0.41
VEGFA-216ENST00000512683 CARD9Q9H257 536 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 SUDS3Q9H7L9 328 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-216ENST00000512683 RAD18Q9NS91 495 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 RBM22Q9NW64 420 aaKnown RBP eCLIP12.46□□□□□ -0.416e-11■■■■■ 34.3
VEGFA-216ENST00000512683 OCIAD1Q9NX40 245 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 ZNHIT2Q9UHR6 403 aa12.46□□□□□ -0.41
VEGFA-216ENST00000512683 CNOT6Q9ULM6 557 aaKnown RBP12.46□□□□□ -0.41
VEGFA-216ENST00000512683 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.46□□□□□ -0.413e-29■□□□□ 9.3
VEGFA-216ENST00000512683 NAV2Q8IVL1 2488 aa12.46□□□□□ -0.42
VEGFA-216ENST00000512683 PRLP01236 227 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 ANKRD34CP0C6C1 535 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 CSF2RBP32927 897 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 SPINT3P49223 89 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 POLE2P56282 527 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 SKOR2Q2VWA4 1001 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-216ENST00000512683 PDPK2PQ6A1A2 396 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 DOK6Q6PKX4 331 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 FAM129CQ86XR2 697 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 ARRDC2Q8TBH0 407 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 PTCD2Q8WV60 388 aaKnown RBP12.45□□□□□ -0.42
VEGFA-216ENST00000512683 APOBEC4Q8WW27 367 aaKnown RBP12.45□□□□□ -0.42
VEGFA-216ENST00000512683 ZNF670Q9BS34 389 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 MLPHQ9BV36 600 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-216ENST00000512683 TDRD1Q9BXT4 1180 aaKnown RBP12.45□□□□□ -0.42
VEGFA-216ENST00000512683 PACSIN1Q9BY11 444 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 ADGRE3Q9BY15 652 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 GPN2Q9H9Y4 310 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-216ENST00000512683 PCDH9Q9HC56 1237 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 PKD2L2Q9NZM6 624 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 PLEKHM1Q9Y4G2 1056 aa12.45□□□□□ -0.42
VEGFA-216ENST00000512683 ZFC3H1O60293 1989 aaKnown RBP12.44□□□□□ -0.42
VEGFA-216ENST00000512683 A6NCN8 305 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 LILRA5A6NI73 299 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms