RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ZBED8Q8IZ13 594 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZCCHC7Q8N3Z6 543 aaKnown RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC185Q8N715 623 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARIH2OSQ8N7S6 290 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARRDC4Q8NCT1 418 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR5B17Q8NGF7 314 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHPT1Q8WUD6 406 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 EDARADDQ8WWZ3 215 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 NELFBQ8WX92 580 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF566Q969W8 418 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 SGF29Q96ES7 293 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDX2Q99626 313 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 NAPGQ99747 312 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRAF4Q9BUZ4 470 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANKRD60Q9BZ19 345 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRRG3Q9BZD7 231 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ERVMER34-1Q9H9K5 563 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 SAR1AQ9NR31 198 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLC4Q9NSK0 619 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 CNOT11Q9UKZ1 510 aaKnown RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDYLQ9Y232 598 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 INVSQ9Y283 1065 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 TSC22D4Q9Y3Q8 395 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 HEY1Q9Y5J3 304 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 USF3Q68DE3 2245 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 MTMR11A4FU01 709 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 K7ESF4 209 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 M0R082 166 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 DCLK1O15075 740 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRODHO43272 600 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZBTB43O43298 467 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 SUPT3HO75486 399 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 DAB1O75553 588 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATP5HO75947 161 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 MBD4O95243 580 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNH1O95259 989 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 GJB5O95377 273 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRT1P04264 644 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 HIST1H2ABP04908 130 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 PSAPP07602 524 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 MMEP08473 750 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZSCAN5DPP0CG00 497 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF30P17039 623 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 HDCP19113 662 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 WARSP23381 471 aaKnown RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 GSTT1P30711 240 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 DDOSTP39656 456 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCR10P46092 362 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERPINB10P48595 397 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 HSPA13P48723 471 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 CASP6P55212 293 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 WNT3P56703 355 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 C21orf58P58505 322 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ISL1P61371 349 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 DHX9Q08211 1270 aaKnown RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIM32Q13049 653 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERINC3Q13530 473 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 NFYCQ13952 458 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ELOAQ14241 798 aaKnown RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 MFSD10Q14728 455 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 PTPN20Q4JDL3 420 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF789Q5FWF6 425 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALG10BQ5I7T1 473 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 LMBRD2Q68DH5 695 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 PSRC1Q6PGN9 363 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHRDL2Q6WN34 429 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 HIST3H2AQ7L7L0 130 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZC3H18Q86VM9 953 aaKnown RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLHDC8AQ8IYD2 350 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 CADM3Q8N126 398 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 KREMEN2Q8NCW0 462 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 MCUQ8NE86 351 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 VN1R2Q8NFZ6 395 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM40Q8WWA1 233 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 HIST1H2ACQ93077 130 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 HAVCR1Q96D42 359 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 WDR89Q96FK6 387 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 QKIQ96PU8 341 aaKnown RBP eCLIP1.65□□□□□ -2.151e-6■■■■□ 26.5
TRAPPC13-211ENST00000512009 ACOX2Q99424 681 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADI1Q9BV57 179 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 NPLQ9BXD5 320 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 PBX4Q9BYU1 374 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 OSBPL8Q9BZF1 889 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 VPS16Q9H269 839 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 MFSD1Q9H3U5 465 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 DUSP21Q9H596 190 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM96AQ9H5X1 160 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 ELL3Q9HB65 397 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 AS3MTQ9HBK9 375 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLHL11Q9NVR0 708 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM181Q9P2C4 612 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 APOBEC2Q9Y235 224 aaKnown RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 FRMD4BQ9Y2L6 1034 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 RWDD3Q9Y3V2 267 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRAF6Q9Y4K3 522 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 IPPQ9Y573 584 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHGA5Q9Y5G8 931 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 GMPPBQ9Y5P6 360 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 SNX5Q9Y5X3 404 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 hCG_1818297A0A087WSY0 165 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms