RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CLP1Q92989 425 aaKnown RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 NUDT4Q9NZJ9 180 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ELOVL7A1L3X0 281 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 GPR180Q86V85 440 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 CFAP206Q8IYR0 622 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 SETD6Q8TBK2 473 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 OXCT2Q9BYC2 517 aaPredicted RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 PCBD2Q9H0N5 130 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 DNAJC11Q9NVH1 559 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 WDR70Q9NW82 654 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 PIM2Q9P1W9 311 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ASCC3Q8N3C0 2202 aaKnown RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 H3BNH8 94 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 EPCAMP16422 314 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 LAMTOR4Q0VGL1 99 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 CCDC58Q4VC31 144 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ZNF772Q68DY9 489 aaPredicted RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 STYK1Q6J9G0 422 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 FITM2Q8N6M3 262 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 PTGR2Q8N8N7 351 aaPredicted RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 NACC2Q96BF6 587 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 C11orf24Q96F05 449 aaPredicted RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 PPP1R16AQ96I34 528 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 PRORSD1PA6NEY8 169 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 KERAO60938 352 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 SOX11P35716 441 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 CCNIQ14094 377 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ANKS1BQ7Z6G8 1248 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ZNF696Q9H7X3 374 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ERVK-11Q9UQG0 969 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 VWA7Q9Y334 891 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 GNRH1P01148 92 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ANXA8P13928 327 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 BRMS1LQ5PSV4 323 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 C11orf96Q7Z7L8 435 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 OR5K1Q8NHB7 308 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 CPVLQ9H3G5 476 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 SEMA3GQ9NS98 782 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ALG5Q9Y673 324 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 IGSF6O95976 241 aa8.34□□□□□ -1.08
HTT-208ENST00000510626 IFNW1P05000 195 aa8.34□□□□□ -1.08
HTT-208ENST00000510626 CD72P21854 359 aa8.34□□□□□ -1.08
HTT-208ENST00000510626 CLK3P49761 638 aaKnown RBP8.34□□□□□ -1.08
HTT-208ENST00000510626 DDX39BQ13838 428 aaKnown RBP8.34□□□□□ -1.08
HTT-208ENST00000510626 HACD4Q5VWC8 232 aa8.34□□□□□ -1.08
HTT-208ENST00000510626 ACOT1Q86TX2 421 aa8.34□□□□□ -1.08
HTT-208ENST00000510626 CCDC24Q8N4L8 307 aa8.34□□□□□ -1.08
HTT-208ENST00000510626 VRK1Q99986 396 aaPredicted RBP8.34□□□□□ -1.08
HTT-208ENST00000510626 SNX4O95219 450 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 THP07101 528 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 CBR4Q8N4T8 237 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 BTF3L4Q96K17 158 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 LRRC4CQ9HCJ2 640 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 TSPAN16Q9UKR8 245 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 FAM234BA2RU67 622 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 DHX15O43143 795 aaKnown RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 ASGR1P07306 291 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 TYMPP19971 482 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 OR1E1P30953 314 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 SCARF1Q14162 830 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 ZNF311Q5JNZ3 666 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 KCNK18Q7Z418 384 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 GALNT6Q8NCL4 622 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 SLC30A2Q9BRI3 323 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 PIF1Q9H611 641 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 PPP2R3BQ9Y5P8 575 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 PRR5-ARHGAP8B1AHC4 643 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 MMP10P09238 476 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 CDH1P12830 882 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 ARHGAP8P85298 464 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 ATP13A4Q4VNC1 1196 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 C1orf186Q6ZWK4 172 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 PORCNQ9H237 461 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 TSR3Q9UJK0 312 aaKnown RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 CDH7Q9ULB5 785 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 B8ZZF3 427 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 GRHL2Q6ISB3 625 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 PANX1Q96RD7 426 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 PXMP2Q9NR77 195 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 INTS7Q9NVH2 962 aaKnown RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 ZMYM5Q9UJ78 669 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 A0A0J9YYE9 177 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 A0A1B0GVI7 797 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 DENRO43583 198 aaKnown RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 PRPS2P11908 318 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 ZNF773Q6PK81 442 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 RNF157Q96PX1 679 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 ABCC13Q9NSE7 274 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 OGDHLQ9ULD0 1010 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 EFCAB9A8MZ26 197 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 PAPSS2O95340 614 aaPredicted RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 LYPLA2O95372 231 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 TPTEP56180 551 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 ZMYND11Q15326 602 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 BEND7Q8N7W2 519 aaPredicted RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 ARL5BQ96KC2 179 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 USP29Q9HBJ7 922 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 PLA2G4CQ9UP65 541 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 DOLKQ9UPQ8 538 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms