RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ZNF71Q9NQZ8 489 aaPredicted RBP13.26□□□□□ -0.29
DDX41-210ENST00000509576 ANO10Q9NW15 660 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 PCSK5Q92824 1860 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 A0A1W2PQ67 120 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 PRR19A6NJB7 356 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 CSTF2P33240 577 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDX41-210ENST00000509576 ATP1A2P50993 1020 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 ZNF135P52742 658 aaPredicted RBP13.25□□□□□ -0.29
DDX41-210ENST00000509576 CDH6P55285 790 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 GPLD1P80108 840 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 GALNT2Q10471 571 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 CDC20Q12834 499 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 NFATC2Q13469 925 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 DPYSL3Q14195 570 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 RALGPS1Q5JS13 557 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 IYDQ6PHW0 289 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 USP45Q70EL2 814 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 NLRP8Q86W28 1048 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 NIPA2Q8N8Q9 360 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 TMEM63CQ9P1W3 806 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 SLC23A2Q9UGH3 650 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 NENFQ9UMX5 172 aa13.25□□□□□ -0.29
DDX41-210ENST00000509576 TMEM184BQ9Y519 407 aaPredicted RBP13.25□□□□□ -0.29
DDX41-210ENST00000509576 CDK11BP21127 795 aaKnown RBP13.24□□□□□ -0.29
DDX41-210ENST00000509576 ARL4AP40617 200 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 GARSP41250 739 aaKnown RBP13.24□□□□□ -0.29
DDX41-210ENST00000509576 TAS2R40P59535 323 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 UBE2IP63279 158 aaKnown RBP13.24□□□□□ -0.29
DDX41-210ENST00000509576 HHEXQ03014 270 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 TYRO3Q06418 890 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 PAFAH1B3Q15102 231 aaKnown RBP13.24□□□□□ -0.29
DDX41-210ENST00000509576 QPCTQ16769 361 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 KHDC1Q4VXA5 237 aaKnown RBP13.24□□□□□ -0.29
DDX41-210ENST00000509576 DCAF12Q5T6F0 453 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 WDR74Q6RFH5 385 aaPredicted RBP13.24□□□□□ -0.29
DDX41-210ENST00000509576 CHST15Q7LFX5 561 aaPredicted RBP13.24□□□□□ -0.29
DDX41-210ENST00000509576 GALNT13Q8IUC8 556 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 NRSN1Q8IZ57 195 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 PQLC3Q8N755 202 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 CNTD1Q8N815 330 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 TEKT4Q8WW24 435 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 SLC38A3Q99624 504 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 PRDM8Q9NQV8 689 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 KCTD5Q9NXV2 234 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 ANKMY1Q9P2S6 941 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 KLHL3Q9UH77 587 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 TMPRSS11EQ9UL52 423 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 SLC30A1Q9Y6M5 507 aa13.24□□□□□ -0.29
DDX41-210ENST00000509576 SPTBN1Q01082 2364 aaKnown RBP13.24□□□□□ -0.29
DDX41-210ENST00000509576 MN1Q10571 1320 aaPredicted RBP13.23□□□□□ -0.29
DDX41-210ENST00000509576 A0A087X0T9 212 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 A0A1B0GTH6 734 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 ZNF891A8MT65 544 aaPredicted RBP13.23□□□□□ -0.29
DDX41-210ENST00000509576 STK17BO94768 372 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 FAM228BP0C875 321 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 SFTPCP11686 197 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 ACP5P13686 325 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 ZNF30P17039 623 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 ZNF8P17098 575 aaPredicted RBP13.23□□□□□ -0.29
DDX41-210ENST00000509576 SPINT3P49223 89 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 SH3BP2P78314 561 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 GBE1Q04446 702 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 KLHL30Q0D2K2 578 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 ANO6Q4KMQ2 910 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 BOLA3Q53S33 107 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 SASS6Q6UVJ0 657 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 TMEM135Q86UB9 458 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 NLGN4XQ8N0W4 816 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 NLGN4YQ8NFZ3 816 aaPredicted RBP13.23□□□□□ -0.29
DDX41-210ENST00000509576 EXD1Q8NHP7 514 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 NCSTNQ92542 709 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 ABHD17AQ96GS6 310 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 PLEKHG4BQ96PX9 1271 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 LYSMD1Q96S90 227 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 SARS2Q9NP81 518 aaKnown RBP13.23□□□□□ -0.29
DDX41-210ENST00000509576 FBXO8Q9NRD0 319 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 AKAP7Q9P0M2 348 aaPredicted RBP13.23□□□□□ -0.29
DDX41-210ENST00000509576 VPS18Q9P253 973 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 ZNF624Q9P2J8 865 aaPredicted RBP13.23□□□□□ -0.29
DDX41-210ENST00000509576 ATXN10Q9UBB4 475 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 ZNHIT2Q9UHR6 403 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 TUBD1Q9UJT1 453 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 PLAAQ9Y263 795 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 SCINQ9Y6U3 715 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 FER1L5A0AVI2 2057 aa13.23□□□□□ -0.29
DDX41-210ENST00000509576 MATN3O15232 486 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 ASMTLO95671 621 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 C9P02748 559 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 PDGFAP04085 211 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 CYP1A2P05177 515 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 BRAFP15056 766 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 CA5AP35218 305 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 PBX1P40424 430 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 CASRP41180 1078 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 STAT5AP42229 794 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 LEPRP48357 1165 aaKnown RBP13.22□□□□□ -0.29
DDX41-210ENST00000509576 ZBTB17Q13105 803 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 LRP8Q14114 963 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 DEFB109BQ30KR1 87 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms