RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 ACTL7AQ9Y615 435 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 VWA8A3KMH1 1905 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 CCDC160A6NGH7 325 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 NME4O00746 187 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 ECI2O75521 394 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 CHEK2O96017 543 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 SLC6A4P31645 630 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 ATP5C1P36542 298 aaKnown RBP17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 TXNL4AP83876 142 aaKnown RBP17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 CREB5Q02930 508 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 BNIP2Q12982 314 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 INPP5AQ14642 412 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 COQ5Q5HYK3 327 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 ZBTB49Q6ZSB9 765 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 EFL1Q7Z2Z2 1120 aaKnown RBP17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 SPATA19Q7Z5L4 167 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 CANT1Q8WVQ1 401 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 NMD3Q96D46 503 aaKnown RBP17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 GLT1D1Q96MS3 346 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 AQP12BA6NM10 295 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 SLC38A8A6NNN8 435 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 H7C4K7 107 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 KDELR3O43731 214 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 TIPRLO75663 272 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 ELNP15502 786 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 NR1H2P55055 460 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 C11orf91Q3C1V1 193 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 HMBOX1Q6NT76 420 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 TXNDC11Q6PKC3 985 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 AQP12AQ8IXF9 295 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 ANKFN1Q8N957 763 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 LRCH3Q96II8 777 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 GPR21Q99679 349 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 PFDN4Q9NQP4 134 aa17.83■□□□□ 0.45
CCHCR1-228ENST00000509552 BTN3A1O00481 513 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 STX16O14662 325 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 VPS26AO75436 327 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 RPS17P08708 135 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 HSD17B1P14061 328 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 ATP6V1B2P21281 511 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 CES1P23141 567 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 FOXM1Q08050 763 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 APOFQ13790 326 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 PTPRNQ16849 979 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 ERMP1Q7Z2K6 904 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 SLC15A3Q8IY34 581 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 METTL25Q8N6Q8 603 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 MDGA1Q8NFP4 955 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 C2orf15Q8WU43 125 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 EXOC2Q96KP1 924 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 TMEM79Q9BSE2 394 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 HAUS8Q9BT25 410 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 NUSAP1Q9BXS6 441 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 CCM2LQ9NUG4 571 aaPredicted RBP17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 MED16Q9Y2X0 877 aa17.83■□□□□ 0.44
CCHCR1-228ENST00000509552 ANKRD36A6QL64 1941 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 CDC7O00311 574 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 GIPC1O14908 333 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 HNRNPRO43390 633 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 CLDN11O75508 207 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 VNN2O95498 520 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 MLYCDO95822 493 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 BMP2P12643 396 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 IL10P22301 178 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 RGRP47804 291 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 SPATS1Q496A3 300 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 PABPC1LQ4VXU2 614 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 SETMARQ53H47 684 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 TBCELQ5QJ74 424 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 KRT80Q6KB66 452 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 FUT10Q6P4F1 479 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 BLOC1S3Q6QNY0 202 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 RSPO2Q6UXX9 243 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 TSPEARQ8WU66 669 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 FUBP1Q96AE4 644 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 LRRC58Q96CX6 371 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 SLC29A1Q99808 456 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 TDRD1Q9BXT4 1180 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 PTTG2Q9NZH5 202 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 AURKCQ9UQB9 309 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 PCDHB7Q9Y5E2 793 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 OAS3Q9Y6K5 1087 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 NPEPPSL1A6NEC2 478 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 VILLO15195 856 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 LPOP22079 712 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 TTPAP49638 278 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 KCNK10P57789 538 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 CAPRIN1Q14444 709 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 CYTH1Q15438 398 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 OGFOD2Q6N063 350 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 MYO1HQ8N1T3 1032 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 GOLM1Q8NBJ4 401 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 LPCAT1Q8NF37 534 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 GMPR2Q9P2T1 348 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 TRMT6Q9UJA5 497 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 AGO1Q9UL18 857 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 DMTF1Q9Y222 760 aa17.82■□□□□ 0.44
CCHCR1-228ENST00000509552 MYOCOSA0A1B0GUC4 107 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 DHRS12A0PJE2 317 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ARHGAP10A1A4S6 786 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms