RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 PTPN2P17706 415 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 AGTR2P50052 363 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 ACSBG2Q5FVE4 666 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 DPY19L3Q6ZPD9 716 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 LCA5Q86VQ0 697 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 OR2AP1Q8NGE2 309 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 ACDQ96AP0 544 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 LINGO1Q96FE5 620 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 GSTO2Q9H4Y5 243 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 TRMT6Q9UJA5 497 aaKnown RBP14.8□□□□□ -0.04
PHF3-209ENST00000509330 ARHGAP26Q9UNA1 814 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 COMMD10Q9Y6G5 202 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 HNRNPCL1O60812 293 aaKnown RBP14.8□□□□□ -0.04
PHF3-209ENST00000509330 CEBPBP17676 345 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 CES1P23141 567 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 ARL1P40616 181 aaPredicted RBP14.8□□□□□ -0.04
PHF3-209ENST00000509330 FOXA1P55317 472 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 NME5P56597 212 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 AP1S1P61966 158 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 XIAPP98170 497 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 BTKQ06187 659 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 ZNF678Q5SXM1 525 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 SNX32Q86XE0 403 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 ITFG1Q8TB96 612 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 PEX13Q92968 403 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 ZFYVE19Q96K21 471 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 STN1Q9H668 368 aaKnown RBP14.8□□□□□ -0.04
PHF3-209ENST00000509330 ATP13A3Q9H7F0 1226 aa14.8□□□□□ -0.04
PHF3-209ENST00000509330 INTS10Q9NVR2 710 aaKnown RBP14.8□□□□□ -0.04
PHF3-209ENST00000509330 TRIM16O95361 564 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 CCNHP51946 323 aaPredicted RBP14.79□□□□□ -0.04
PHF3-209ENST00000509330 ECT2LQ008S8 904 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 RIPK1Q13546 671 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 UNC50Q53HI1 259 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 SERPINA9Q86WD7 417 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 ULK2Q8IYT8 1036 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 CPXM2Q8N436 756 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 SLC45A3Q96JT2 553 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 CIPCQ9C0C6 399 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 FBRSL1Q9HCM7 1045 aaKnown RBP14.79□□□□□ -0.04
PHF3-209ENST00000509330 A0A0J9YYE9 177 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 VPS26AO75436 327 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 ECI2O75521 394 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 TRBC1P01850 177 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 COX4I1P13073 169 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 MTHFD2P13995 350 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 MSX2P35548 267 aaPredicted RBP14.79□□□□□ -0.04
PHF3-209ENST00000509330 HMGCLP35914 325 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 TTPAP49638 278 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 ATXN3P54252 364 aaPredicted RBP14.79□□□□□ -0.04
PHF3-209ENST00000509330 RAD51Q06609 339 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 C18orf21Q32NC0 220 aaPredicted RBP14.79□□□□□ -0.04
PHF3-209ENST00000509330 TCEAL5Q5H9L2 206 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 ADGRD2Q7Z7M1 963 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 GALNT7Q86SF2 657 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 DEFB107AQ8IZN7 70 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 CFAP61Q8NHU2 1237 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 LKAAEAR1Q8TD35 194 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 NOTCH4Q99466 2003 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 PIDD1Q9HB75 910 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 MID1IP1Q9NPA3 183 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 BTRCQ9Y297 605 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 PRSS21Q9Y6M0 314 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 NPHS1O60500 1241 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 RPSAP08865 295 aaKnown RBP14.79□□□□□ -0.04
PHF3-209ENST00000509330 PIK3R1P27986 724 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 SERPINA4P29622 427 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 EEF1DP29692 281 aaKnown RBP14.79□□□□□ -0.04
PHF3-209ENST00000509330 VIPR2P41587 438 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 TCHHL1Q5QJ38 904 aaPredicted RBP14.79□□□□□ -0.04
PHF3-209ENST00000509330 C9orf50Q5SZB4 431 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 C22orf39Q6P5X5 142 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 SCIMPQ6UWF3 145 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 SCUBE1Q8IWY4 988 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 RNF148Q8N7C7 305 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 ASIC4Q96FT7 647 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 CNDP1Q96KN2 507 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 ZDHHC4Q9NPG8 344 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 IL26Q9NPH9 171 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 FAM8A1Q9UBU6 413 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 SLC7A8Q9UHI5 535 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 ASB1Q9Y576 335 aa14.79□□□□□ -0.04
PHF3-209ENST00000509330 PRUNE2Q8WUY3 3088 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 C9JVG2 144 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 SDHDO14521 159 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 CFLARO15519 480 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 TPBGLP0DKB5 382 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 BPIP17213 487 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 IMPDH1P20839 514 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 CPOXP36551 454 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 NUDT2P50583 147 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 SH3BP2P78314 561 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 CCDC6Q16204 474 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 ARHGAP15Q53QZ3 475 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 FAM91A1Q658Y4 838 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 TMEM215Q68D42 235 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 PTRHD1Q6GMV3 140 aaKnown RBP14.78□□□□□ -0.04
PHF3-209ENST00000509330 PSRC1Q6PGN9 363 aaPredicted RBP14.78□□□□□ -0.04
PHF3-209ENST00000509330 DNAJC5GQ8N7S2 189 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 CD200R1Q8TD46 325 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms