RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TERB1Q8NA31 727 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 TSTD1Q8NFU3 115 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 NEK11Q8NG66 645 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 WFDC5Q8TCV5 224 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 FAM81BQ96LP2 452 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 PCDHB18PQ96TA0 734 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 MAGEB5Q9BZ81 275 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 CIPCQ9C0C6 399 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 REXO4Q9GZR2 422 aaKnown RBP4.67□□□□□ -1.66
NUP54-206ENST00000508465 SIK2Q9H0K1 926 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 RAB6CQ9H0N0 254 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 ARRDC1-AS1Q9H2J1 176 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 SYNCQ9H7C4 482 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 FAM204AQ9H8W3 233 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 POPDC2Q9HBU9 364 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 ABCB8Q9NUT2 735 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 TBCCD1Q9NVR7 557 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 DDIT4Q9NX09 232 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 ELOVL2Q9NXB9 296 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 CALCOCO1Q9P1Z2 691 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 BCCIPQ9P287 314 aaKnown RBP eCLIP4.67□□□□□ -1.66
NUP54-206ENST00000508465 SLC17A6Q9P2U8 582 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 PRKAB1Q9Y478 270 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 STON1Q9Y6Q2 735 aa4.67□□□□□ -1.66
NUP54-206ENST00000508465 HELZP42694 1942 aaKnown RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 DRGXA6NNA5 263 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 SMTNL1A8MU46 457 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 TMCO5BA8MYB1 307 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 KCNU1A8MYU2 1149 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 M0QYT0 321 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 ADCY5O95622 1261 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 HLA-EP13747 358 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 HOXB2P14652 356 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 GABRG2P18507 467 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 PRKCHP24723 683 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 HOXD9P28356 352 aaPredicted RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 HLA-FP30511 346 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 CD70P32970 193 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 SOX5P35711 763 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 EIF2DP41214 584 aaKnown RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 STAT1P42224 750 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 MEF2AQ02078 507 aaPredicted RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 ZNF234Q14588 700 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 IQCB1Q15051 598 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 PLK5Q496M5 336 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 MPPE1Q53F39 396 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 EFHC1Q5JVL4 640 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 EOGTQ5NDL2 527 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 TRNP1Q6NT89 227 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 KIAA1324Q6UXG2 1013 aaKnown RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 CACNA2D4Q7Z3S7 1137 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 ADIPOR2Q86V24 386 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 LUZP1Q86V48 1076 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 CACUL1Q86Y37 369 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 UNC45BQ8IWX7 931 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 FAM217AQ8IXS0 508 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 APCDD1Q8J025 514 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 TMEM132CQ8N3T6 1108 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 CPXM2Q8N436 756 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 CARNMT1Q8N4J0 409 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 TMEM35BQ8NCS4 154 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 ANKRD20A12PQ8NF67 263 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 IPO4Q8TEX9 1081 aaKnown RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 IGSF8Q969P0 613 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 C18orf8Q96DM3 657 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 SLC39A13Q96H72 371 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 LMLNQ96KR4 655 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 SLC2A13Q96QE2 648 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 SPAG5Q96R06 1193 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 TBCBQ99426 244 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 ALOXE3Q9BYJ1 711 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 NAT10Q9H0A0 1025 aaKnown RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 CD93Q9NPY3 652 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 CASS4Q9NQ75 786 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 ANLNQ9NQW6 1124 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 RXFP3Q9NSD7 469 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 PIGVQ9NUD9 493 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 SEPT11Q9NVA2 429 aaKnown RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.66□□□□□ -1.66
NUP54-206ENST00000508465 NOCTQ9UK39 431 aaKnown RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 SLC27A6Q9Y2P4 619 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 CEP83Q9Y592 693 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 DNAH14Q0VDD8 3507 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 MYO16Q9Y6X6 1858 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 MYO18AQ92614 2054 aaKnown RBP4.66□□□□□ -1.66
NUP54-206ENST00000508465 ABCA7Q8IZY2 2146 aa4.66□□□□□ -1.66
NUP54-206ENST00000508465 PATJQ8NI35 1801 aa4.65□□□□□ -1.66
NUP54-206ENST00000508465 H0Y626 953 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 I6L893 689 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 TIMM44O43615 452 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 SYNCRIPO60506 623 aaKnown RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 HSF2BPO75031 334 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 SRGAP2O75044 1071 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 ITGA10O75578 1167 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 CNTN5O94779 1100 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 SERPINC1P01008 464 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 IGLV3-25P01717 112 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 APOEP02649 317 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms