RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 MAPK10P53779 464 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 PEX6Q13608 980 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 LY6DQ14210 128 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 GALNT3Q14435 633 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 ZFYVE27Q5T4F4 411 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 NKAIN2Q5VXU1 208 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 USP53Q70EK8 1073 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 ZFAND4Q86XD8 727 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 VSIG1Q86XK7 387 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 SFRP1Q8N474 314 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 SLC35G2Q8TBE7 412 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 USP7Q93009 1102 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 CCDC74BQ96LY2 380 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 OLFM3Q96PB7 478 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 TRIB3Q96RU7 358 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 CHP1Q99653 195 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 CEP41Q9BYV8 373 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 ANKRD66B4E2M5 251 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 APOL1O14791 398 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 THRAP10827 490 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 CCL4P13236 92 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 PLA2G2AP14555 144 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 ARSDP51689 593 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 LIMK2P53671 638 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 BIRC2Q13490 618 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 LYSMD3Q7Z3D4 306 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 DTX1Q86Y01 620 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 VSTM4Q8IW00 320 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 RHOT2Q8IXI1 618 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 OR4D9Q8NGE8 314 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 SLC37A2Q8TED4 501 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 PMEPA1Q969W9 287 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 EID2BQ96D98 161 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 MLPHQ9BV36 600 aaPredicted RBP12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 B3GNT4Q9C0J1 378 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 BRD8Q9H0E9 1235 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 SPTLC3Q9NUV7 552 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 PKD2L2Q9NZM6 624 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 TMEM9Q9P0T7 183 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 PRKAB1Q9Y478 270 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 HEY1Q9Y5J3 304 aa12.9□□□□□ -0.34
HMGCS1-205ENST00000508319 A6NCN8 305 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 ZW10O43264 779 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 CBFA2T2O43439 604 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 ASMTLO95671 621 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 KRT1P04264 644 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 PTMSP20962 102 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 CD82P27701 267 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 ARHGAP25P42331 645 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 GPLD1P80108 840 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 AP1B1Q10567 949 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 SQSTM1Q13501 440 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 TRA2AQ13595 282 aaKnown RBP eCLIP12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 LRRC38Q5VT99 294 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 NPNTQ6UXI9 565 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 CHST15Q7LFX5 561 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 VASH2Q86V25 355 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 ZNF761Q86XN6 746 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 IMP4Q96G21 291 aaKnown RBP12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 ADGRE3Q9BY15 652 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 FAM83DQ9H4H8 585 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 NHEJ1Q9H9Q4 299 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 WDR70Q9NW82 654 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 ZNHIT6Q9NWK9 470 aaKnown RBP12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 KCNK4Q9NYG8 393 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 AKAP7Q9P0M2 348 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 TBC1D29Q9UFV1 150 aa12.89□□□□□ -0.35
HMGCS1-205ENST00000508319 RGSL1A5PLK6 1076 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 PIRTP0C851 137 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 FGF3P11487 239 aaPredicted RBP12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 ACP5P13686 325 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 MPSTP25325 297 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 PDK1Q15118 436 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 ZNF605Q86T29 641 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 CCHCR1Q8TD31 782 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 TADA1Q96BN2 335 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 SGF29Q96ES7 293 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 MED8Q96G25 268 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 CCDC42Q96M95 316 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 AGAP3Q96P47 875 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 RMI1Q9H9A7 625 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 ZFYVE1Q9HBF4 777 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 NFKBIL1Q9UBC1 381 aaPredicted RBP12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 ZNHIT2Q9UHR6 403 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 KCNK6Q9Y257 313 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 PCDHGA4Q9Y5G9 962 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 PCDHGA3Q9Y5H0 932 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 ADGRG1Q9Y653 693 aa12.88□□□□□ -0.35
HMGCS1-205ENST00000508319 MYO18BQ8IUG5 2567 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 TRBV23OR9-2A0A075B6M9 112 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 STMND1H3BQB6 276 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 PPP1R12AO14974 1030 aaPredicted RBP12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 DUX1O43812 170 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 NUAK1O60285 661 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 TPM1P09493 284 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 F3P13726 295 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms