RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 FDXRP22570 491 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 HOXC13P31276 330 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 CCR1P32246 355 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 UFM1P61960 85 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 SLC10A7Q0GE19 358 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 GRSF1Q12849 480 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 SEMA3AQ14563 771 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 NR1D2Q14995 579 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 PAN2Q504Q3 1202 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 TIGD7Q6NT04 549 aaPredicted RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 GALNT18Q6P9A2 607 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 DEFB132Q7Z7B7 95 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 PTRH1Q86Y79 214 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 COLGALT2Q8IYK4 626 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 RNF168Q8IYW5 571 aaPredicted RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 TBC1D21Q8IYX1 336 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 PAPD5Q8NDF8 572 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 SNX19Q92543 992 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 CASP10Q92851 521 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 IMP4Q96G21 291 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 TBATAQ96M53 351 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 CSF3RQ99062 836 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 MFSD1Q9H3U5 465 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 MROH6A6NGR9 719 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 FGF10O15520 208 aaPredicted RBP13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 NOL3O60936 208 aaKnown RBP13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 IDO1P14902 403 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 TCF3P15923 654 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 BCAP31P51572 246 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 OR4D2P58180 307 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 PHEXP78562 749 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 FOXM1Q08050 763 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 SIRPB2Q5JXA9 342 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 AFMIDQ63HM1 303 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 ZNF773Q6PK81 442 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 TFAP2DQ7Z6R9 452 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 TERB1Q8NA31 727 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 GLT1D1Q96MS3 346 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 RNF145Q96MT1 663 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 C1orf50Q9BV19 199 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 CHID1Q9BWS9 393 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 CSNK1G1Q9HCP0 422 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 LTB4R2Q9NPC1 389 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 MIOSQ9NXC5 875 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 ZNF639Q9UID6 485 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 IKZF3Q9UKT9 509 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 CDH9Q9ULB4 789 aa13.36□□□□□ -0.27
SNCAIP-209ENST00000508017 MBLAC1A4D2B0 266 aaPredicted RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 CASTOR2A6NHX0 329 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 E9PAM4 449 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 DYNC1LI2O43237 492 aaPredicted RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 SYNCRIPO60506 623 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 ADAM23O75077 832 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 C1RP00736 705 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 PRSS56P0CW18 603 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 EEF1DP29692 281 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 PRDX3P30048 256 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 CYP2C18P33260 490 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 KCNK10P57789 538 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 CDC42EP1Q00587 391 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 RCAN2Q14206 197 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 PCBP1Q15365 356 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 FSCN1Q16658 493 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 TIGD2Q4W5G0 525 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 LDLRAP1Q5SW96 308 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 XAF1Q6GPH4 301 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 GRAMD4Q6IC98 578 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 RAB44Q7Z6P3 723 aaPredicted RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 NAT16Q8N8M0 369 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 RTL3Q8N8U3 475 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 LPPQ93052 612 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 TMEM209Q96SK2 561 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 ATOH8Q96SQ7 321 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 GAD1Q99259 594 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 LHPPQ9H008 270 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 NTN4Q9HB63 628 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 TMEM9Q9P0T7 183 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 PAIP2BQ9ULR5 123 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 LDB2O43679 373 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 SULT1C4O75897 302 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 RSL1D1O76021 490 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 SEC14L2O76054 403 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 ALBP02768 609 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 HAPLN1P10915 354 aaPredicted RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 MBL2P11226 248 aaPredicted RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 ZNF37AP17032 561 aaPredicted RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 SLC26A3P40879 764 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 RXRGP48443 463 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 CLCQ05315 142 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 PDCD4Q53EL6 469 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 RALGPS2Q86X27 583 aaPredicted RBP13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 PDPRQ8NCN5 879 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 CHPT1Q8WUD6 406 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 RSPH1Q8WYR4 309 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 PPP1R2P1Q96PQ5 205 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 TUBA1CQ9BQE3 449 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 NEURL2Q9BR09 285 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 NANOGQ9H9S0 305 aa13.35□□□□□ -0.27
SNCAIP-209ENST00000508017 C8orf4Q9NR00 106 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms