RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 LYPLAL1Q5VWZ2 237 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 SEL1L3Q68CR1 1132 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 KIAA1161Q6NSJ0 714 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 PIANPQ8IYJ0 282 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 TRAM1L1Q8N609 369 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 GPATCH11Q8N954 259 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 GDAP1Q8TB36 358 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 ULK4Q96C45 1275 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 PGM2Q96G03 612 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 ATP6V1G3Q96LB4 118 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 TCF12Q99081 682 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 TPSD1Q9BZJ3 242 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 PREBQ9HCU5 417 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 EURLQ9NYK6 297 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 CRYL1Q9Y2S2 319 aa17.36■□□□□ 0.37
RNF4-209ENST00000507784 MTO1Q9Y2Z2 717 aaKnown RBP17.36■□□□□ 0.37
RNF4-209ENST00000507784 LRRC72A6NJI9 287 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 ITGA2BP08514 1039 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 MAT2AP31153 395 aaKnown RBP17.35■□□□□ 0.37
RNF4-209ENST00000507784 FMO4P31512 558 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 ACSL1P33121 698 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 CA5AP35218 305 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 GPR1P46091 355 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 CXCL12P48061 93 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 PXNP49023 591 aaPredicted RBP17.35■□□□□ 0.37
RNF4-209ENST00000507784 LIMK2P53671 638 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 ATP13A5Q4VNC0 1218 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 RAET1GQ6H3X3 334 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 CERS6Q6ZMG9 384 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 CYP2U1Q7Z449 544 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 ZC3HC1Q86WB0 502 aaKnown RBP17.35■□□□□ 0.37
RNF4-209ENST00000507784 RAVER1Q8IY67 606 aaKnown RBP17.35■□□□□ 0.37
RNF4-209ENST00000507784 FAM131CQ96AQ9 280 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 VPS39Q96JC1 886 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 ELMO2Q96JJ3 720 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 RHOJQ9H4E5 214 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 SGK2Q9HBY8 427 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 MED4Q9NPJ6 270 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 INTS10Q9NVR2 710 aaKnown RBP17.35■□□□□ 0.37
RNF4-209ENST00000507784 ZFR2Q9UPR6 939 aaKnown RBP17.35■□□□□ 0.37
RNF4-209ENST00000507784 PLXNB3Q9ULL4 1909 aa17.35■□□□□ 0.37
RNF4-209ENST00000507784 FAM95CA0A1B0GW59 222 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 A0A1W2PPM1 405 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 PI15O43692 258 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 PAK4O96013 591 aaPredicted RBP17.34■□□□□ 0.37
RNF4-209ENST00000507784 C7P10643 843 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 OXTRP30559 389 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 DBN1Q16643 649 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 TYSND1Q2T9J0 566 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 HENMT1Q5T8I9 393 aaKnown RBP17.34■□□□□ 0.37
RNF4-209ENST00000507784 RNF187Q5TA31 235 aaPredicted RBP17.34■□□□□ 0.37
RNF4-209ENST00000507784 CWF19L1Q69YN2 538 aaKnown RBP17.34■□□□□ 0.37
RNF4-209ENST00000507784 NEK5Q6P3R8 708 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 ZNF765Q7L2R6 523 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 HORMAD1Q86X24 394 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 SLC41A1Q8IVJ1 513 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 NXPE1Q8N323 547 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 DCLK2Q8N568 766 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 OR2T34Q8NGX1 318 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 MTBPQ96DY7 904 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 ZSCAN5AQ9BUG6 496 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 TRPM6Q9BX84 2022 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 CCDC68Q9H2F9 335 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 KDM4CQ9H3R0 1056 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 SPATA6Q9NWH7 488 aaPredicted RBP17.34■□□□□ 0.37
RNF4-209ENST00000507784 KCTD5Q9NXV2 234 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 USP36Q9P275 1121 aaKnown RBP17.34■□□□□ 0.37
RNF4-209ENST00000507784 NFKBIL1Q9UBC1 381 aaPredicted RBP17.34■□□□□ 0.37
RNF4-209ENST00000507784 SLC39A10Q9ULF5 831 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 VPS9D1Q9Y2B5 631 aa17.34■□□□□ 0.37
RNF4-209ENST00000507784 TMEM221A6NGB7 291 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 FADS2P1A8MWK0 482 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 HMGB1P1B2RPK0 211 aaPredicted RBP17.33■□□□□ 0.36
RNF4-209ENST00000507784 H3BQF6 201 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 M0R296 226 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 INPP4BO15327 924 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 SEMA4FO95754 770 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 PCCBP05166 539 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 ZNF7P17097 686 aaPredicted RBP17.33■□□□□ 0.36
RNF4-209ENST00000507784 ACRV1P26436 265 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 PTGER3P43115 390 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 MAGEA9P43362 315 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 CCR3P51677 355 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 CLCN5P51795 746 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 SLC12A2P55011 1212 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 MAGOHP61326 146 aaKnown RBP17.33■□□□□ 0.36
RNF4-209ENST00000507784 USP10Q14694 798 aaKnown RBP17.33■□□□□ 0.36
RNF4-209ENST00000507784 GALNT7Q86SF2 657 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 SRRM1Q8IYB3 904 aaKnown RBP17.33■□□□□ 0.36
RNF4-209ENST00000507784 CAMKK1Q8N5S9 505 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 SCG3Q8WXD2 468 aaKnown RBP17.33■□□□□ 0.36
RNF4-209ENST00000507784 RLN3Q8WXF3 142 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 PKNOX2Q96KN3 472 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 NDNQ99608 321 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 KLF6Q99612 283 aaPredicted RBP17.33■□□□□ 0.36
RNF4-209ENST00000507784 IER2Q9BTL4 223 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 SLC17A9Q9BYT1 436 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 ZDHHC3Q9NYG2 299 aa17.33■□□□□ 0.36
RNF4-209ENST00000507784 TRBV5-4A0A0C4DH59 114 aa17.32■□□□□ 0.36
RNF4-209ENST00000507784 HMX2A2RU54 273 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms