RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 NPIPB15A6NHN6 443 aaPredicted RBP4.69□□□□□ -1.66
LINC01088-203ENST00000507476 TTC36A6NLP5 189 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 EIF3CLB5ME19 914 aaKnown RBP4.69□□□□□ -1.66
LINC01088-203ENST00000507476 CHL1O00533 1208 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 SYN3O14994 580 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 LMX1BO60663 402 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 CCDC175P0C221 793 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 CYP4B1P13584 511 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 MCM3P25205 808 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 DCTDP32321 178 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 RGS2P41220 211 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 GLIPR1P48060 266 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 AIMP2Q13155 320 aaKnown RBP4.69□□□□□ -1.66
LINC01088-203ENST00000507476 CAMK2DQ13557 499 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 TRIM29Q14134 588 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 C2orf76Q3KRA6 126 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 GLIPR1L2Q4G1C9 344 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 LRRC24Q50LG9 513 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 XKR9Q5GH70 373 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 C9orf152Q5JTZ5 239 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 STPG1Q5TH74 334 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 GARNL3Q5VVW2 1013 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 HIST2H2BCQ6DN03 193 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 TYW3Q6IPR3 259 aaKnown RBP4.69□□□□□ -1.66
LINC01088-203ENST00000507476 ALKBH5Q6P6C2 394 aaKnown RBP4.69□□□□□ -1.66
LINC01088-203ENST00000507476 KLHL35Q6PF15 583 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 IYDQ6PHW0 289 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 RHBDF2Q6PJF5 856 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 RASGRP2Q7LDG7 609 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 DCUN1D3Q8IWE4 304 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 ADGRF2Q8IZF7 708 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 RFWD2Q8NHY2 731 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 TAF4BQ92750 862 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 ARHGEF2Q92974 986 aaKnown RBP4.69□□□□□ -1.66
LINC01088-203ENST00000507476 CMTM3Q96MX0 182 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 TTC12Q9H892 705 aaPredicted RBP4.69□□□□□ -1.66
LINC01088-203ENST00000507476 PCDHB16Q9NRJ7 776 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 HPF1Q9NWY4 346 aa4.69□□□□□ -1.66
LINC01088-203ENST00000507476 SEC63Q9UGP8 760 aaKnown RBP4.69□□□□□ -1.66
LINC01088-203ENST00000507476 MTF2Q9Y483 593 aaPredicted RBP4.69□□□□□ -1.66
LINC01088-203ENST00000507476 RUSC2Q8N2Y8 1516 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 hCG_1809904A0A1W2PP81 198 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 A0A1W2PPE2 198 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 A0A1W2PR64 198 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 GAGE10A6NGK3 116 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 LIPT2A6NK58 231 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 SH2D7A6NKC9 451 aaPredicted RBP4.68□□□□□ -1.66
LINC01088-203ENST00000507476 TRIM64CA6NLI5 447 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 PI4K2BG5E9Z4 385 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 TIMM23O14925 209 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 BCAT2O15382 392 aaPredicted RBP4.68□□□□□ -1.66
LINC01088-203ENST00000507476 IPO8O15397 1037 aaKnown RBP4.68□□□□□ -1.66
LINC01088-203ENST00000507476 SLC7A4O43246 635 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 CSPG5O95196 566 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 PGM3O95394 542 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 P4HA1P13674 534 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 FDPSP14324 419 aaKnown RBP4.68□□□□□ -1.66
LINC01088-203ENST00000507476 CHN1P15882 459 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 CDH2P19022 906 aaPredicted RBP4.68□□□□□ -1.66
LINC01088-203ENST00000507476 GP5P40197 560 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 PNPLA4P41247 253 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 MATR3P43243 847 aaKnown RBP eCLIP4.68□□□□□ -1.661e-6■■■■□ 22.8
LINC01088-203ENST00000507476 AMPHP49418 695 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 LIG4P49917 911 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 PTP4A2Q12974 167 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 TNFAIP1Q13829 316 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 SLMAPQ14BN4 828 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 E2F5Q15329 346 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 ADIPOQQ15848 244 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 PKN2Q16513 984 aaKnown RBP4.68□□□□□ -1.66
LINC01088-203ENST00000507476 ERMARDQ5T6L9 678 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 RAB12Q6IQ22 244 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 NCEH1Q6PIU2 408 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 SARM1Q6SZW1 724 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 C9orf139Q6ZV77 190 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 NLRP14Q86W24 1093 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 POC5Q8NA72 575 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 SORCS1Q8WY21 1168 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 HSPH1Q92598 858 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 ATP6V0A1Q93050 837 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 EXOC4Q96A65 974 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 KLHL29Q96CT2 875 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 PGAP3Q96FM1 320 aaPredicted RBP4.68□□□□□ -1.66
LINC01088-203ENST00000507476 CCDC114Q96M63 670 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 PIP5K1AQ99755 562 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 MMADHCQ9H3L0 296 aaPredicted RBP4.68□□□□□ -1.66
LINC01088-203ENST00000507476 TRPV4Q9HBA0 871 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 RRP7BPQ9NSQ0 103 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 GIMAP4Q9NUV9 329 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 COQ3Q9NZJ6 369 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 MPP6Q9NZW5 540 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 HCN3Q9P1Z3 774 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 HOOK1Q9UJC3 728 aaKnown RBP4.68□□□□□ -1.66
LINC01088-203ENST00000507476 ADAM18Q9Y3Q7 739 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 POMT1Q9Y6A1 747 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 IKBKGQ9Y6K9 419 aa4.68□□□□□ -1.66
LINC01088-203ENST00000507476 FAM237BA0A1B0GVD1 139 aa4.67□□□□□ -1.66
LINC01088-203ENST00000507476 FAM90A20PA6NIJ5 464 aa4.67□□□□□ -1.66
LINC01088-203ENST00000507476 A8MXE2 369 aa4.67□□□□□ -1.66
LINC01088-203ENST00000507476 CTDSP2O14595 271 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms