RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 AGBL5Q8NDL9 886 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 CCDC112Q8NEF3 446 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 HTR3CQ8WXA8 447 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 ART4Q93070 314 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 HDAC11Q96DB2 347 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 AHCYL2Q96HN2 611 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 LYSMD1Q96S90 227 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 SLC38A3Q99624 504 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 DPYSL5Q9BPU6 564 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 PACSIN1Q9BY11 444 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 DTLQ9NZJ0 730 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 PKD2L2Q9NZM6 624 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 IFNKQ9P0W0 207 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 VPS18Q9P253 973 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 UVRAGQ9P2Y5 699 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 ZNHIT2Q9UHR6 403 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 CNOT6Q9ULM6 557 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 RPL26L1Q9UNX3 145 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 KCNK6Q9Y257 313 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 PCDHGA3Q9Y5H0 932 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 B3GALT1Q9Y5Z6 326 aa11.45□□□□□ -0.58
HMGCS1-204ENST00000507293 GOLGA6L19H0YKK7 550 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 KCNK1O00180 336 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 DUX1O43812 170 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 MMP2P08253 660 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 ACP5P13686 325 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 CASP14P31944 242 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 CD86P42081 329 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 SPINT3P49223 89 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 GPLD1P80108 840 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 HHEXQ03014 270 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 GALNT3Q14435 633 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 TBR1Q16650 682 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 HENMT1Q5T8I9 393 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 TMEM71Q6P5X7 295 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 XKR5Q6UX68 686 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 PRICKLE2Q7Z3G6 844 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 FAM129CQ86XR2 697 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 RAVER1Q8IY67 606 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 OR10G6Q8NH81 332 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 CTNNBL1Q8WYA6 563 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 RAPGEF5Q92565 580 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 NKD1Q969G9 470 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 ZNF830Q96NB3 372 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 DDA1Q9BW61 102 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 FAM117AQ9C073 453 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 FAM83DQ9H4H8 585 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 OCIAD1Q9NX40 245 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 SLC39A1Q9NY26 324 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 TBC1D29Q9UFV1 150 aa11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 HEMK1Q9Y5R4 338 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-204ENST00000507293 LRRD1A4D1F6 860 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 EFCAB7A8K855 629 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 A8MU76 341 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 SNX2O60749 519 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 JCHAINP01591 159 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 H2AFZP0C0S5 128 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 KDELR1P24390 212 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 MAN1A1P33908 653 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 UGT1A3P35503 534 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 MAPK9P45984 424 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 IFI35P80217 286 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 NFKB2Q00653 900 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 PPIDQ08752 370 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 ZBTB17Q13105 803 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 NFATC2Q13469 925 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 MESDQ14696 234 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 SLC18A3Q16572 532 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 SNAP47Q5SQN1 464 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 FAM182AQ5T1J6 154 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 ALS2CLQ60I27 953 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 ANKS6Q68DC2 871 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 H2AFVQ71UI9 128 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 LYSMD3Q7Z3D4 306 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 IL22RA1Q8N6P7 574 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 CNTD1Q8N815 330 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 CCHCR1Q8TD31 782 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 RNF157Q96PX1 679 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 HERPUD2Q9BSE4 406 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 MLPHQ9BV36 600 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 CEP41Q9BYV8 373 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 STN1Q9H668 368 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 RMI1Q9H9A7 625 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 ARFGAP3Q9NP61 516 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 SARS2Q9NP81 518 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 STARD5Q9NSY2 213 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 LCMT1Q9UIC8 334 aa11.43□□□□□ -0.58
HMGCS1-204ENST00000507293 A6NCN8 305 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 B4E171 279 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 ANKRD66B4E2M5 251 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 GRID2O43424 1007 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 RAD1O60671 282 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 SLC4A1P02730 911 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 TMEM253P0C7T8 217 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 LIFP15018 202 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 ITGB6P18564 788 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 HNRNPH3P31942 346 aaKnown RBP11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 TSPAN7P41732 249 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 ZNF648Q5T619 568 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms