RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 PLXNB3Q9ULL4 1909 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 PI4KAP42356 2102 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 VPS13AQ96RL7 3174 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 ESYT3A0FGR9 886 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 CCDC78A2IDD5 438 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 CACNB4O00305 520 aaPredicted RBP12.75□□□□□ -0.37
TCOF1-210ENST00000506767 PRAMEF1O95521 474 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 CA5AP35218 305 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 ARL4CP56559 192 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 GRIK2Q13002 908 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 ITGA9Q13797 1035 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 PTK2BQ14289 1009 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 SF3A2Q15428 464 aaKnown RBP12.75□□□□□ -0.37
TCOF1-210ENST00000506767 HIF1AQ16665 826 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 ZNF423Q2M1K9 1284 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 GON4LQ3T8J9 2241 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 DNAJC21Q5F1R6 531 aaKnown RBP12.75□□□□□ -0.37
TCOF1-210ENST00000506767 MACC1Q6ZN28 852 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 FBXO25Q8TCJ0 367 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 ZNF398Q8TD17 642 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 GLYATL1Q969I3 302 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 LRRC39Q96DD0 335 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 MFSD3Q96ES6 412 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 EBNA1BP2Q99848 306 aaKnown RBP12.75□□□□□ -0.37
TCOF1-210ENST00000506767 WDR83Q9BRX9 315 aaKnown RBP12.75□□□□□ -0.37
TCOF1-210ENST00000506767 SUDS3Q9H7L9 328 aaPredicted RBP12.75□□□□□ -0.37
TCOF1-210ENST00000506767 FSCN3Q9NQT6 498 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 GDF3Q9NR23 364 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 PHPT1Q9NRX4 125 aaPredicted RBP12.75□□□□□ -0.37
TCOF1-210ENST00000506767 FAM114A2Q9NRY5 505 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 ZDHHC18Q9NUE0 388 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 SMOXQ9NWM0 555 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 PNMA8BQ9ULN7 279 aaPredicted RBP12.75□□□□□ -0.37
TCOF1-210ENST00000506767 TEX264Q9Y6I9 313 aa12.75□□□□□ -0.37
TCOF1-210ENST00000506767 LRP4O75096 1905 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 TMEM131Q92545 1883 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 TRBV5-4A0A0C4DH59 114 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 LNP1A1A4G5 178 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 CCDC162PA2VCL2 907 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 TMEM202A6NGA9 273 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 TNFRSF10CO14798 259 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 INPP4BO15327 924 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 EIF3HO15372 352 aaKnown RBP eCLIP12.74□□□□□ -0.37
TCOF1-210ENST00000506767 GPR39O43194 453 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 UGT1A9O60656 530 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 BANF1O75531 89 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 CEACAM5P06731 702 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 SYPP08247 313 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 ENGP17813 658 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 UGT1A6P19224 532 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 UGT1A1P22309 533 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 UGT1A4P22310 534 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 ARNTP27540 789 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 HTR1BP28222 390 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 MC4RP32245 332 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 UGT1A3P35503 534 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 UGT1A5P35504 534 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 RXRGP48443 463 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 THOP1P52888 689 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 PLTPP55058 493 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 EIF2B5Q13144 721 aaKnown RBP12.74□□□□□ -0.37
TCOF1-210ENST00000506767 NFATC2Q13469 925 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 BBS9Q3SYG4 887 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 GPR33Q49SQ1 333 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 ANKRD20A4Q4UJ75 823 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 IL27RAQ6UWB1 636 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 CES3Q6UWW8 571 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 MICALCLQ6ZW33 695 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 SNX20Q7Z614 316 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 IGDCC3Q8IVU1 814 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 HDAC10Q969S8 669 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 STAMBPL1Q96FJ0 436 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 SCARF2Q96GP6 870 aaPredicted RBP12.74□□□□□ -0.37
TCOF1-210ENST00000506767 WDR92Q96MX6 357 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 FCRL3Q96P31 734 aaPredicted RBP12.74□□□□□ -0.37
TCOF1-210ENST00000506767 TRIM56Q9BRZ2 755 aaKnown RBP12.74□□□□□ -0.37
TCOF1-210ENST00000506767 NAT9Q9BTE0 207 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 FAM129AQ9BZQ8 928 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 FOXP3Q9BZS1 431 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 PHACTR1Q9C0D0 580 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 ASB8Q9H765 288 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 UGT1A7Q9HAW7 530 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 UGT1A10Q9HAW8 530 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 UGT1A8Q9HAW9 530 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 SAMD15Q9P1V8 674 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 SLC17A4Q9Y2C5 497 aa12.74□□□□□ -0.37
TCOF1-210ENST00000506767 FNDC3AQ9Y2H6 1198 aaKnown RBP12.74□□□□□ -0.37
TCOF1-210ENST00000506767 OAS3Q9Y6K5 1087 aaKnown RBP12.74□□□□□ -0.37
TCOF1-210ENST00000506767 ZCWPW2A0A1B0GU75 182 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 OR51F1A6NGY5 319 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 DFNA5O60443 496 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 FOXD2O60548 495 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-210ENST00000506767 USP1O94782 785 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 SLC25A14O95258 325 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-210ENST00000506767 SLU7O95391 586 aaKnown RBP12.73□□□□□ -0.37
TCOF1-210ENST00000506767 GOT2P00505 430 aaKnown RBP12.73□□□□□ -0.37
TCOF1-210ENST00000506767 FUCA1P04066 466 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 CSF2P04141 144 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 PGAM1P18669 254 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 KELP23276 732 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms