RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZFYVE1Q9HBF4 777 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 MAGEE1Q9HCI5 957 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 THSD1Q9NS62 852 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 PKD2L2Q9NZM6 624 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 SEPT10Q9P0V9 454 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 LRIT1Q9P2V4 623 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 REXO2Q9Y3B8 237 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 PLEKHM1Q9Y4G2 1056 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 PCYT1BQ9Y5K3 369 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 OAS3Q9Y6K5 1087 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 SCN8AQ9UQD0 1980 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 LOC285095A0A1B0GVY8 99 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 TMX2-CTNND1H3BSU7 103 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 INPP4BO15327 924 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 MTSS1O43312 755 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 B4GAT1O43505 415 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 ECEL1O95672 775 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 NDST3O95803 873 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 ITGA2BP08514 1039 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 HOXB3P14651 431 aaPredicted RBP9□□□□□ -0.97
PDLIM5-209ENST00000506632 CTNNA1P35221 906 aaKnown RBP9□□□□□ -0.97
PDLIM5-209ENST00000506632 ACTR1BP42025 376 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 INHBCP55103 352 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 ACTR1AP61163 376 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 CCDC173Q0VFZ6 552 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 EIF3IQ13347 325 aaKnown RBP9□□□□□ -0.97
PDLIM5-209ENST00000506632 PEX6Q13608 980 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 LLGL1Q15334 1064 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 KAZNQ674X7 775 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 SLC30A9Q6PML9 568 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 KDELC1Q6UW63 502 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 RAD9BQ6WBX8 426 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 TMEM139Q8IV31 216 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 SLITRK4Q8IW52 837 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 Q8N9G6 341 aaPredicted RBP9□□□□□ -0.97
PDLIM5-209ENST00000506632 GPR26Q8NDV2 337 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 CCHCR1Q8TD31 782 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 RBM41Q96IZ5 413 aaKnown RBP9□□□□□ -0.97
PDLIM5-209ENST00000506632 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
PDLIM5-209ENST00000506632 TMEM74Q96NL1 305 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 QKIQ96PU8 341 aaKnown RBP eCLIP9□□□□□ -0.974e-9■■■■■ 33.7
PDLIM5-209ENST00000506632 VAT1Q99536 393 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 HERPUD2Q9BSE4 406 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 FOXP3Q9BZS1 431 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 SUDS3Q9H7L9 328 aaPredicted RBP9□□□□□ -0.97
PDLIM5-209ENST00000506632 SYNDIG1Q9H7V2 258 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 LUC7LQ9NQ29 371 aaKnown RBP9□□□□□ -0.97
PDLIM5-209ENST00000506632 NPDC1Q9NQX5 325 aaPredicted RBP9□□□□□ -0.97
PDLIM5-209ENST00000506632 ATXN7L1Q9ULK2 861 aaPredicted RBP9□□□□□ -0.97
PDLIM5-209ENST00000506632 EFR3BQ9Y2G0 817 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9□□□□□ -0.97
PDLIM5-209ENST00000506632 ZNF711Q9Y462 761 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 ADGRG1Q9Y653 693 aa9□□□□□ -0.97
PDLIM5-209ENST00000506632 A6NCN8 305 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 HACD1B0YJ81 288 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 APOC4-APOC2K7ER74 178 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 PLD2O14939 933 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 PPM1DO15297 605 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 PJA2O43164 708 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 PMPCBO75439 489 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 EPOP01588 193 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 APOC2P02655 101 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 ATP1A1P05023 1023 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 PIRTP0C851 137 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 NFKB1P19838 968 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 RBMS1P29558 406 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 PTPN7P35236 360 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 UGT1A5P35504 534 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 GPR3P46089 330 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 FASLGP48023 281 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 WNT3AP56704 352 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 COPS2P61201 443 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 XRCC4Q13426 336 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 SQSTM1Q13501 440 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 NOMO1Q15155 1222 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 PCSK7Q16549 785 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 CLPPQ16740 277 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 SOWAHCQ53LP3 525 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 PDPK2PQ6A1A2 396 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 MARK2Q7KZI7 788 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 RAB11FIP2Q7L804 512 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 KDELC2Q7Z4H8 507 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 DAAM2Q86T65 1068 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 ZC3H18Q86VM9 953 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 GALNT13Q8IUC8 556 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 ZNF567Q8N184 647 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 SFRP1Q8N474 314 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 TRAM1L1Q8N609 369 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 LRRC57Q8N9N7 239 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 KCNE4Q8WWG9 221 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 P3H4Q92791 437 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 OXNAD1Q96HP4 312 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 MRGPRX2Q96LB1 330 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 BBC3Q96PG8 261 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 FCRL5Q96RD9 977 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 SRPK1Q96SB4 655 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 ZSCAN5AQ9BUG6 496 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 DPH1Q9BZG8 443 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 STRADBQ9C0K7 418 aa8.99□□□□□ -0.97
PDLIM5-209ENST00000506632 LACRTQ9GZZ8 138 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms