RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 CCNCP24863 283 aa20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 CSF2RBP32927 897 aa20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 GARSP41250 739 aaKnown RBP20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 MAPK9P45984 424 aa20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 STC1P52823 247 aa20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 CLCA4Q14CN2 919 aa20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 ZFYVE27Q5T4F4 411 aa20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 TRIM48Q8IWZ4 208 aa20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 FATE1Q969F0 183 aa20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 BPIFA3Q9BQP9 254 aa20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 RIOK2Q9BVS4 552 aaKnown RBP20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 TRIM7Q9C029 511 aa20.86■□□□□ 0.93
SQSTM1-210ENST00000506042 SDK2Q58EX2 2172 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 C1orf232A0A0U1RR37 186 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 A8MU76 341 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 MATN3O15232 486 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 SERPINC1P01008 464 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 F3P13726 295 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 TCN2P20062 427 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 MPSTP25325 297 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 NFATC2Q13469 925 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 MAP7Q14244 749 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 CRTC2Q53ET0 693 aaPredicted RBP20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 APTXQ7Z2E3 356 aaKnown RBP20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 SCAMP4Q969E2 229 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 RTP4Q96DX8 246 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 COX14Q96I36 57 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 FAM83DQ9H4H8 585 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 PCDH9Q9HC56 1237 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 RBM22Q9NW64 420 aaKnown RBP eCLIP20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 OCIAD1Q9NX40 245 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 PILRAQ9UKJ1 303 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 KCTD3Q9Y597 815 aa20.85■□□□□ 0.93
SQSTM1-210ENST00000506042 TRBV23OR9-2A0A075B6M9 112 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 DDX3XO00571 662 aaKnown RBP eCLIP20.84■□□□□ 0.939e-8■■■■■ 53.3
SQSTM1-210ENST00000506042 FZD6O60353 706 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 WT1P19544 449 aaPredicted RBP20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 IL1R2P27930 398 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 CASRP41180 1078 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 PTSQ03393 145 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 TYRO3Q06418 890 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 CDC20Q12834 499 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 NCAPHQ15003 741 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 PDK2Q15119 407 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 ALG1LQ6GMV1 187 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 TP53INP2Q8IXH6 220 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 KCTD6Q8NC69 237 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 LPCAT1Q8NF37 534 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 SRPK1Q96SB4 655 aaKnown RBP20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 MLPHQ9BV36 600 aaPredicted RBP20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 TDRD1Q9BXT4 1180 aaKnown RBP20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 CARD9Q9H257 536 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 ETNK2Q9NVF9 386 aa20.84■□□□□ 0.93
SQSTM1-210ENST00000506042 LILRA5A6NI73 299 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 TOX3O15405 576 aaPredicted RBP20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 SNX2O60749 519 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 STK17BO94768 372 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 PDHA1P08559 390 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 KRT7P08729 469 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 ACP5P13686 325 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 VCLP18206 1134 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 TNNT3P45378 269 aaPredicted RBP20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 GALNT2Q10471 571 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 FIGNQ5HY92 759 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 ZNF569Q5MCW4 686 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 CCDC70Q6NSX1 233 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 IYDQ6PHW0 289 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 ARHGAP22Q7Z5H3 698 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 TRIM74Q86UV6 250 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 PTRH1Q86Y79 214 aaKnown RBP20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 LYSMD1Q96S90 227 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 ZNF670Q9BS34 389 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 CHKBQ9Y259 395 aa20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 TMEM184BQ9Y519 407 aaPredicted RBP20.83■□□□□ 0.93
SQSTM1-210ENST00000506042 ZFC3H1O60293 1989 aaKnown RBP20.83■□□□□ 0.92
SQSTM1-210ENST00000506042 GRID2O43424 1007 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 SOD1P00441 154 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 ANKRD34CP0C6C1 535 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 PRKAR1AP10644 381 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 AMD1P17707 334 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 PAFAH1B3Q15102 231 aaKnown RBP20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 PDPK2PQ6A1A2 396 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 ATCAYQ86WG3 371 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 ZNF761Q86XN6 746 aaPredicted RBP20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 BMPERQ8N8U9 685 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 CCNYQ8ND76 341 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 STARD8Q92502 1023 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 SEC14L1Q92503 715 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 MAML1Q92585 1016 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 SYN2Q92777 582 aaPredicted RBP20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 NSMCE3Q96MG7 304 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 TSGA13Q96PP4 275 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 ZSCAN5AQ9BUG6 496 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 NUP85Q9BW27 656 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 OSGEPL1Q9H4B0 414 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 UCK1Q9HA47 277 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 TMEM9Q9P0T7 183 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 CPNE7Q9UBL6 633 aa20.82■□□□□ 0.92
SQSTM1-210ENST00000506042 KCND3Q9UK17 655 aa20.82■□□□□ 0.92
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