RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 TTC7BQ86TV6 843 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 LDB1Q86U70 411 aaPredicted RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 EXOC3L1Q86VI1 746 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 LMNTD2Q8IXW0 634 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 C4orf33Q8N1A6 199 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 FAM160A2Q8N612 972 aaPredicted RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 TXNDC5Q8NBS9 432 aaKnown RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 C2CD4AQ8NCU7 369 aaPredicted RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 OR4L1Q8NH43 312 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 HCAR2Q8TDS4 363 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 MZB1Q8WU39 189 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 MTBPQ96DY7 904 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 VPS39Q96JC1 886 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 SMC6Q96SB8 1091 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 FAM129BQ96TA1 746 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 KLF6Q99612 283 aaPredicted RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 ARRDC1-AS1Q9H2J1 176 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 RHOJQ9H4E5 214 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 FAM96AQ9H5X1 160 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 IL17CQ9P0M4 197 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 SENP1Q9P0U3 644 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 FBXO5Q9UKT4 447 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 PPIL1Q9Y3C6 166 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 LAMA1P25391 3075 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 SDK1Q7Z5N4 2213 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 GLYATL1P3A0A0U1RQE8 302 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 TMEM8BA6NDV4 472 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 GOLGA8CPA6NN73 597 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 GOLGA8RI6L899 631 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 TPP1O14773 563 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 AXIN1O15169 862 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 SPAG7O75391 227 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 PRAMEF1O95521 474 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 ADH1BP00325 375 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 PRSS56P0CW18 603 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 CHRM1P11229 460 aaPredicted RBP9.31□□□□□ -0.92
TPM3-218ENST00000505010 BRAFP15056 766 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 CREB1P16220 341 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 ZNF30P17039 623 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 BPIP17213 487 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 OGNP20774 298 aaKnown RBP9.31□□□□□ -0.92
TPM3-218ENST00000505010 PSMA3P25788 255 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 FOXN2P32314 431 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 SPAM1P38567 509 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 MMP12P39900 470 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 NEK3P51956 506 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 STC1P52823 247 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 GYS2P54840 703 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 RALGDSQ12967 914 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 SEMA3AQ14563 771 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 CST6Q15828 149 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 ZNF776Q68DI1 518 aaPredicted RBP9.31□□□□□ -0.92
TPM3-218ENST00000505010 PSAPL1Q6NUJ1 521 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 FBXL19Q6PCT2 694 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 KDM7AQ6ZMT4 941 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 ERN2Q76MJ5 926 aaKnown RBP9.31□□□□□ -0.92
TPM3-218ENST00000505010 TAS2R42Q7RTR8 314 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 SDCCAG8Q86SQ7 713 aaPredicted RBP9.31□□□□□ -0.92
TPM3-218ENST00000505010 CILP2Q8IUL8 1156 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 SPEM1Q8N4L4 309 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 ARFGAP2Q8N6H7 521 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 GPATCH11Q8N954 259 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 IL17RCQ8NAC3 791 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 GPR150Q8NGU9 434 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 OR2T3Q8NH03 318 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 KCNV2Q8TDN2 545 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.31□□□□□ -0.92
TPM3-218ENST00000505010 EID2BQ96D98 161 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 SERAC1Q96JX3 654 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 GABRG3Q99928 467 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 WRAP53Q9BUR4 548 aaKnown RBP9.31□□□□□ -0.92
TPM3-218ENST00000505010 RSPH9Q9H1X1 276 aaPredicted RBP9.31□□□□□ -0.92
TPM3-218ENST00000505010 KCNK9Q9NPC2 374 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 RXFP3Q9NSD7 469 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 PCMTD2Q9NV79 361 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 PKD2L2Q9NZM6 624 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 ITM2BQ9Y287 266 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 ACTL7BQ9Y614 415 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 SLC30A1Q9Y6M5 507 aa9.31□□□□□ -0.92
TPM3-218ENST00000505010 FAM95CA0A1B0GW59 222 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 UBA6A0AVT1 1052 aaPredicted RBP9.3□□□□□ -0.92
TPM3-218ENST00000505010 TMEM120BA0PK00 339 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 HMX2A2RU54 273 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 H7C0S8 307 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 NEMP1O14524 444 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 MID1O15344 667 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 GPR39O43194 453 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 SPINT1O43278 529 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 ADAM23O75077 832 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 NDUFS3O75489 264 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 AHSGP02765 367 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 ELFN1P0C7U0 828 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 PYGBP11216 843 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 CHRNB1P11230 501 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 ADRB3P13945 408 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 KRT4P19013 534 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 ITGALP20701 1170 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 SAT1P21673 171 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 GABRB3P28472 473 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 CDKN1CP49918 316 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms