RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 IQCKQ8N0W5 287 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 RYBPQ8N488 228 aaPredicted RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 BEND7Q8N7W2 519 aaPredicted RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 RBMXL3Q8N7X1 1067 aaKnown RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 TMEM102Q8N9M5 508 aaPredicted RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 NETO2Q8NC67 525 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 ST6GALNAC3Q8NDV1 305 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 OR6K2Q8NGY2 324 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 ADAMTS17Q8TE56 1095 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 SNRNP40Q96DI7 357 aaKnown RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 AHCYL2Q96HN2 611 aaKnown RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 CTRCQ99895 268 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 TRIM55Q9BYV6 548 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 TWSG1Q9GZX9 223 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 RAB33BQ9H082 229 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 ING2Q9H160 280 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 ZNF395Q9H8N7 513 aaPredicted RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 CARS2Q9HA77 564 aaKnown RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 LHX9Q9NQ69 397 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 NDFIP2Q9NV92 336 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 EPHA6Q9UF33 1036 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 OR12D3Q9UGF7 316 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 HOOK1Q9UJC3 728 aaKnown RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 TMEM59LQ9UK28 342 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 DNAJC12Q9UKB3 198 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 G3BP2Q9UN86 482 aaKnown RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 NEU3Q9UQ49 428 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 CCDC168Q8NDH2 2452 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 ANKRD36A6QL64 1941 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 KIR2DS5A0A0G2JLQ3 304 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 A0A0G2JNG1 304 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 FAM72CH0Y354 149 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 GOLGA8SH3BPF8 625 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 KIR2DS3K7RE56 304 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 TRAFD1O14545 582 aaPredicted RBP5.96□□□□□ -1.46
GYPB-204ENST00000504951 BUB1O43683 1085 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 BUB1BO60566 1050 aaPredicted RBP5.96□□□□□ -1.46
GYPB-204ENST00000504951 FAM155BO75949 473 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 PYGLP06737 847 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 RAB40ALP0C0E4 278 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 ELFN1P0C7U0 828 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 SLC2A4P14672 509 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 AK4P27144 223 aaPredicted RBP5.96□□□□□ -1.46
GYPB-204ENST00000504951 PTGIRP43119 386 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 HDAC4P56524 1084 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 SOX8P57073 446 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 CDK3Q00526 305 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 KIR2DS5Q14953 304 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 CYTH1Q15438 398 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 CAMK4Q16566 473 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 EXOC3L4Q17RC7 722 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 PARP15Q460N3 678 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 PYCR3Q53H96 274 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 HSP90AA4PQ58FG1 418 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 LRRC73Q5JTD7 316 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 MIIPQ5JXC2 388 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 ATXN7L2Q5T6C5 722 aaPredicted RBP5.96□□□□□ -1.46
GYPB-204ENST00000504951 FAM72AQ5TYM5 149 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 TAF3Q5VWG9 929 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 IZUMO3Q5VZ72 239 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 FAM72DQ6L9T8 149 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 IYDQ6PHW0 289 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 LEKR1Q6ZMV7 388 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 MED25Q71SY5 747 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 PHLDB2Q86SQ0 1253 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 FAM72BQ86X60 149 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 FAM131BQ86XD5 332 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 XYLT1Q86Y38 959 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 DRC7Q8IY82 874 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 FAM71AQ8IYT1 594 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 UMODL1-AS1Q8N2C9 162 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 LZTR1Q8N653 840 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 EMC1Q8N766 993 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 GALNT6Q8NCL4 622 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 SLC37A2Q8TED4 501 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 COG1Q8WTW3 980 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 PATE1Q8WXA2 126 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 KLHL6Q8WZ60 621 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 CENPIQ92674 756 aaPredicted RBP5.96□□□□□ -1.46
GYPB-204ENST00000504951 C18orf8Q96DM3 657 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 STAMBPL1Q96FJ0 436 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 LURAP1Q96LR2 239 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 C9orf72Q96LT7 481 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 CFAP57Q96MR6 1250 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 LRFN5Q96NI6 719 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 RANBP9Q96S59 729 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 HERPUD2Q9BSE4 406 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 ULBP3Q9BZM4 244 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 UNKQ9C0B0 810 aaKnown RBP5.96□□□□□ -1.46
GYPB-204ENST00000504951 NOL6Q9H6R4 1146 aaKnown RBP5.96□□□□□ -1.46
GYPB-204ENST00000504951 SYNCQ9H7C4 482 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 ACSS2Q9NR19 701 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 LHX3Q9UBR4 397 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 ZNHIT2Q9UHR6 403 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 RWDD2AQ9UIY3 292 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 SUFUQ9UMX1 484 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 PPIL1Q9Y3C6 166 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 SPG11Q96JI7 2443 aa5.96□□□□□ -1.46
GYPB-204ENST00000504951 FBN3Q75N90 2809 aa5.95□□□□□ -1.46
GYPB-204ENST00000504951 A0A1B0GUH1 482 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms