RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 PIWIL4Q7Z3Z4 852 aaKnown RBP11.54□□□□□ -0.56
USP46-204ENST00000503060 ARHGAP24Q8N264 748 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 LPCAT1Q8NF37 534 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 TMA16Q96EY4 203 aaKnown RBP11.54□□□□□ -0.56
USP46-204ENST00000503060 OR52B2Q96RD2 323 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 ZBP1Q9H171 429 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 MAN1C1Q9NR34 630 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 LHX3Q9UBR4 397 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 VTI1BQ9UEU0 232 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 ASB3Q9Y575 518 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 PCDHGC4Q9Y5F7 938 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 TYW5A2RUC4 315 aaKnown RBP11.54□□□□□ -0.56
USP46-204ENST00000503060 SYNDIG1LA6NDD5 238 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 NEMP2A6NFY4 417 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 ENO4A6NNW6 628 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 SLCO1B7G3V0H7 640 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 MAGEC1O60732 1142 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 TFEBP19484 476 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 NCF2P19878 526 aaPredicted RBP11.54□□□□□ -0.56
USP46-204ENST00000503060 TYSND1Q2T9J0 566 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 DNAL1Q4LDG9 190 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 METTL21CQ5VZV1 264 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 TRIM67Q6ZTA4 783 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 GLT6D1Q7Z4J2 308 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 PIM3Q86V86 326 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 AADATQ8N5Z0 425 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 TMCO5AQ8N6Q1 288 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 MDGA1Q8NFP4 955 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 OR4K2Q8NGD2 314 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 GIMAP7Q8NHV1 300 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 CCDC126Q96EE4 140 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 SMIM14Q96QK8 99 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 FEM1AQ9BSK4 669 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 SHCBP1LQ9BZQ2 653 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 RNPEPL1Q9HAU8 725 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 NCKIPSDQ9NZQ3 722 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 VPS28Q9UK41 221 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 ITGB1BP2Q9UKP3 347 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 ZMIZ1Q9ULJ6 1067 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 PLA2G4CQ9UP65 541 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 CARD8Q9Y2G2 431 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 OR51B4Q9Y5P0 310 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 A8MT66 165 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 E9PBE3 544 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 KIAA0355O15063 1070 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 ENTPD5O75356 428 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 FGF18O76093 207 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 CNPP09543 421 aaKnown RBP11.53□□□□□ -0.56
USP46-204ENST00000503060 PRSS56P0CW18 603 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 RAG1P15918 1043 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 KCNA5P22460 613 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 GABRR2P28476 465 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 SERPINB5P36952 375 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 ST13P50502 369 aaKnown RBP11.53□□□□□ -0.56
USP46-204ENST00000503060 RAP1GDS1P52306 607 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 STC1P52823 247 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 CYP4F8P98187 520 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 TIAL1Q01085 375 aaKnown RBP eCLIP11.53□□□□□ -0.56
USP46-204ENST00000503060 TRAF2Q12933 501 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 GPR158Q5T848 1215 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 WLSQ5T9L3 541 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 TRIM68Q6AZZ1 485 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 NCEH1Q6PIU2 408 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 AFTPHQ6ULP2 937 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 GALNT5Q7Z7M9 940 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 FAM217AQ8IXS0 508 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 SH3RF2Q8TEC5 729 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 CNDP1Q96KN2 507 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 C1orf21Q9H246 121 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 PCDH10Q9P2E7 1040 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 MTF2Q9Y483 593 aaPredicted RBP11.53□□□□□ -0.56
USP46-204ENST00000503060 KIAA1671Q9BY89 1806 aa11.53□□□□□ -0.56
USP46-204ENST00000503060 TGM5O43548 720 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 ZBTB14O43829 449 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 KCNJ13O60928 360 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 TMCC2O75069 709 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 CTSAP10619 480 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 PCNAP12004 261 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 EZRP15311 586 aaKnown RBP11.52□□□□□ -0.56
USP46-204ENST00000503060 PMLP29590 882 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 CSKP41240 450 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 SUOXP51687 545 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 MXRA7P84157 204 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 CRTC1Q6UUV9 634 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 PHTF2Q8N3S3 785 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 POU5F2Q8N7G0 328 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 WFDC5Q8TCV5 224 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 MRPS31Q92665 395 aaKnown RBP11.52□□□□□ -0.56
USP46-204ENST00000503060 ALG14Q96F25 216 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 AARSD1Q9BTE6 412 aaKnown RBP11.52□□□□□ -0.56
USP46-204ENST00000503060 ADGRE3Q9BY15 652 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 WDR55Q9H6Y2 383 aaPredicted RBP11.52□□□□□ -0.56
USP46-204ENST00000503060 CYP4F12Q9HCS2 524 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 INTS10Q9NVR2 710 aaKnown RBP11.52□□□□□ -0.56
USP46-204ENST00000503060 NOP53Q9NZM5 478 aaKnown RBP11.52□□□□□ -0.56
USP46-204ENST00000503060 NKX1-2Q9UD57 310 aaPredicted RBP11.52□□□□□ -0.56
USP46-204ENST00000503060 VPS51Q9UID3 782 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 LSM7Q9UK45 103 aaKnown RBP11.52□□□□□ -0.56
USP46-204ENST00000503060 OBSL1O75147 1896 aa11.52□□□□□ -0.56
USP46-204ENST00000503060 GOLGA8QA0A0J9YX86 632 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms