RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CFAP61Q8NHU2 1237 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 HM13Q8TCT9 377 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 TRIB2Q92519 343 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 DPF1Q92782 380 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 HDAC11Q96DB2 347 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 ZNF830Q96NB3 372 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 SPAG5Q96R06 1193 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 CITED2Q99967 270 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 DESI2Q9BSY9 194 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 HGH1Q9BTY7 390 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 SLC25A23Q9BV35 468 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 KCNN2Q9H2S1 579 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 GOLPH3LQ9H4A5 285 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 TMEM51Q9NW97 253 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 LARSQ9P2J5 1176 aaKnown RBP5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 DDX25Q9UHL0 483 aaKnown RBP5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 ZNHIT2Q9UHR6 403 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 DBNLQ9UJU6 430 aaKnown RBP5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 ACSL5Q9ULC5 683 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 PCDHA12Q9UN75 941 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 COG5Q9UP83 839 aa5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 SRPRBQ9Y5M8 271 aaKnown RBP5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 ZFP37Q9Y6Q3 630 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P3-201ENST00000502802 KDM4EB2RXH2 506 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 WNT9BO14905 357 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 WDR46O15213 610 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 ZWINTO95229 277 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 TRUB2O95900 331 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 VPREB1P12018 145 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 GNLYP22749 145 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 EIF2S3P41091 472 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 CCR10P46092 362 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 RASSF2P50749 326 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 SELENOVP59797 346 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 SIRPAP78324 504 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 NHLH1Q02575 133 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 COL10A1Q03692 680 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 MTX1Q13505 466 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 FHL2Q14192 279 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 ASIC2Q16515 512 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 EIF2S3LQ2VIR3 472 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 SHQ1Q6PI26 577 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 C11orf88Q6PI97 169 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 TRAT1Q6PIZ9 186 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 PARM1Q6UWI2 310 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 DLK2Q6UY11 383 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 INTS8Q75QN2 995 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 ERN2Q76MJ5 926 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 MON1BQ7L1V2 547 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 SHFQ7M4L6 423 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 CCDC190Q86UF4 302 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 ADIPOR2Q86V24 386 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 PI4KAP1Q8N8J0 262 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 RBM15BQ8NDT2 890 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 OR1J2Q8NGS2 313 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 SETD6Q8TBK2 473 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 FAM162AQ96A26 154 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 ARSGQ96EG1 525 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 LINC00615Q96LM1 132 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 THUMPD3Q9BV44 507 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 NUP85Q9BW27 656 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 QTRT1Q9BXR0 403 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 FAM129AQ9BZQ8 928 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 PPIL3Q9H2H8 161 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 CLK4Q9HAZ1 481 aaKnown RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 FZD3Q9NPG1 666 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 OR6C3Q9NZP0 311 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 FLRT1Q9NZU1 646 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 SLC9A2Q9UBY0 812 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 STK39Q9UEW8 545 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 PCDHGA5Q9Y5G8 931 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 CCDC88BA6NC98 1476 aa5.3□□□□□ -1.56
HMGB1P3-201ENST00000502802 EDDM13A0A1B0GTR0 161 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 WIPF3A6NGB9 483 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 E5RJQ4 531 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 H0YIN7 160 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 ADAM10O14672 748 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 SLC7A4O43246 635 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 SPRY1O43609 319 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 LDB2O43679 373 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 SLU7O95391 586 aaKnown RBP5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 ATP5DP30049 168 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 ME1P48163 572 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 P2RX3P56373 397 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 KRTAP10-2P60368 255 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 PPP2R2BQ00005 443 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 MYBPC2Q14324 1141 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 HYAL4Q2M3T9 481 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 C6orf163Q5TEZ5 329 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 TMEM211Q6ICI0 200 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 SLC18B1Q6NT16 456 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 SUSD1Q6UWL2 747 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 B3GNT6Q6ZMB0 384 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 CEP57Q86XR8 500 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 AFAP1L1Q8TED9 768 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 APBB2Q92870 758 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 DDOQ99489 341 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 GPATCH1Q9BRR8 931 aaKnown RBP5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 SYT17Q9BSW7 474 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms