RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 ACTL8Q9H568 366 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 NLRC4Q9NPP4 1024 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 CUEDC1Q9NWM3 386 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 SIDT1Q9NXL6 827 aaKnown RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 PCSK1NQ9UHG2 260 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 AP4E1Q9UPM8 1137 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 NOTCH2Q04721 2471 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 DDAH2O95865 285 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 SOD1P00441 154 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 AMD1P17707 334 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 ERCC2P18074 760 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 POU3F2P20265 443 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 LEPRP48357 1165 aaKnown RBP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 KLK7P49862 253 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 RENBPP51606 427 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 ZNF143P52747 638 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 POLR2FP61218 127 aaKnown RBP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 IL10RBQ08334 325 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 NSUN2Q08J23 767 aaKnown RBP eCLIP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 SEMA5AQ13591 1074 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 MAP7Q14244 749 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 PPP6R3Q5H9R7 873 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 TMCO4Q5TGY1 634 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 IYDQ6PHW0 289 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 ADAMTSL4Q6UY14 1074 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 LYSMD3Q7Z3D4 306 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 ZNF677Q86XU0 584 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 PLXDC1Q8IUK5 500 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 PGBD5Q8N414 524 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 TTC30BQ8N4P2 665 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 LZTR1Q8N653 840 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 NPWQ8N729 165 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 SH3KBP1Q96B97 665 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 SCARF2Q96GP6 870 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 TCTN2Q96GX1 697 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 C9orf72Q96LT7 481 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 KCTD15Q96SI1 283 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 RIOK2Q9BVS4 552 aaKnown RBP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 STK33Q9BYT3 514 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 OSGEPL1Q9H4B0 414 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 NOD2Q9HC29 1040 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 ARFGAP3Q9NP61 516 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 SARS2Q9NP81 518 aaKnown RBP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 SLAMF7Q9NQ25 335 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 ACSS2Q9NR19 701 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 KCTD5Q9NXV2 234 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 CPNE7Q9UBL6 633 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 ERRFI1Q9UJM3 462 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-209ENST00000498725 PADI1Q9ULC6 663 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 PHTF1Q9UMS5 762 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 LRBAP50851 2863 aa9.03□□□□□ -0.96
CCDC171-209ENST00000498725 CENPEQ02224 2701 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 A6NL46 340 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 SIGLEC16A6NMB1 481 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 HTRA2O43464 458 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-209ENST00000498725 KRT86O43790 486 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 KIF1CO43896 1103 aaKnown RBP9.02□□□□□ -0.97
CCDC171-209ENST00000498725 SPAG6O75602 509 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 TIAF1O95411 115 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 CALB1P05937 261 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 NFKBIAP25963 317 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 EPHA4P54764 986 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 OGDHQ02218 1023 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 RFTN1Q14699 578 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-209ENST00000498725 NR6A1Q15406 480 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 SYCP1Q15431 976 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 CLEC16AQ2KHT3 1053 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 PLA2G4EQ3MJ16 856 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 ZNF648Q5T619 568 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-209ENST00000498725 LRRC66Q68CR7 880 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 DCUN1D2Q6PH85 259 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 FAM92BQ6ZTR7 304 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 USP45Q70EL2 814 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 TECPR1Q7Z6L1 1165 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 TRIM48Q8IWZ4 208 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 CBARPQ8N350 705 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-209ENST00000498725 C3orf20Q8ND61 904 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 C19orf60Q96EN9 201 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 PSKH2Q96QS6 385 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 NUDCD1Q96RS6 583 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 CNPY3Q9BT09 278 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 SNRNP25Q9BV90 132 aaKnown RBP9.02□□□□□ -0.97
CCDC171-209ENST00000498725 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-209ENST00000498725 SLC29A3Q9BZD2 475 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 AKIRIN1Q9H9L7 192 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-209ENST00000498725 TAB2Q9NYJ8 693 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 OGFRQ9NZT2 677 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 SLC30A1Q9Y6M5 507 aa9.02□□□□□ -0.97
CCDC171-209ENST00000498725 MN1Q10571 1320 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-209ENST00000498725 PSMD11O00231 422 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 ZNF185O15231 689 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 DNAJC6O75061 913 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 SOCS5O75159 536 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 SORBS2O94875 1100 aaKnown RBP9.01□□□□□ -0.97
CCDC171-209ENST00000498725 UBXN7O94888 489 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 PGLSO95336 258 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 PDHA1P08559 390 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 UNGP13051 313 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-209ENST00000498725 F3P13726 295 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 DESP17661 470 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms