RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 RGPD3A6NKT7 1758 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 RGPD4Q7Z3J3 1758 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SUPT3HB4E1H0 165 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 IPO13O94829 963 aaKnown RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 CYBBP04839 570 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SUPT20HL2P0C7V6 817 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 MLNP12872 115 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 CPB1P15086 417 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 CD36P16671 472 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 ERCC2P18074 760 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SLC6A2P23975 617 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 MAGEA3P43357 314 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 NR2C2P49116 596 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SERPINH1P50454 418 aaKnown RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 STAT5BP51692 787 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 NPTX1Q15818 432 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SUPT20HL1Q3ZLR7 823 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 ATP6AP1LQ52LC2 224 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 TXNDC11Q6PKC3 985 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 CTU1Q7Z7A3 348 aaKnown RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SLC22A15Q8IZD6 547 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 PTCD2Q8WV60 388 aaKnown RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 NGLY1Q96IV0 654 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 MYRFLQ96LU7 910 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 IL22Q9GZX6 179 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 FAM49AQ9H0Q0 323 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 DSN1Q9H410 356 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SARS2Q9NP81 518 aaKnown RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 UCKL1Q9NWZ5 548 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 ACTR3BQ9P1U1 418 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SNX6Q9UNH7 406 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 B3GNT3Q9Y2A9 372 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 ASB14A6NK59 587 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 TEX28O15482 410 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SSX4O60224 188 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 CILPO75339 1184 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 TNFRSF21O75509 655 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SEC14L2O76054 403 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 DIRAS1O95057 198 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 ABCB1P08183 1280 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 HOXC6P09630 235 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 ALDOCP09972 364 aaKnown RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 CRHBPP24387 322 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 PIGAP37287 484 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 CASP3P42574 277 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 NAB1Q13506 487 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SURF1Q15526 300 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 UGP2Q16851 508 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 SGO1Q5FBB7 561 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 STEAP3Q658P3 488 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 FUNDC1Q8IVP5 155 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 NSUN5Q96P11 429 aaKnown RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 KCNS3Q9BQ31 491 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 MRPL57Q9BQC6 102 aaKnown RBP10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 FBXO5Q9UKT4 447 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 NUP205Q92621 2012 aa10.58□□□□□ -0.72
TRAPPC12-223ENST00000497597 NUP214P35658 2090 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 ZCWPW2A0A1B0GU75 182 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 EFCAB9A8MZ26 197 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 AP3D1O14617 1153 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 MITFO75030 526 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 GPIP06744 558 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 SBK3P0C264 359 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 STAG3L1P0CL83 205 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 TGM1P22735 817 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 LEPRP48357 1165 aaKnown RBP10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 GALNT2Q10471 571 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 BNIP2Q12982 314 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 RBBP7Q16576 425 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 SMN1Q16637 294 aaKnown RBP10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 NAPEPLDQ6IQ20 393 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 ILDR2Q71H61 639 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 PDZD4Q76G19 769 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 PIM3Q86V86 326 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 PAF1Q8N7H5 531 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 PPP1R13LQ8WUF5 828 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 STON2Q8WXE9 905 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 CHCHD6Q9BRQ6 235 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 C2orf40Q9H1Z8 148 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 ARMC1Q9NVT9 282 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 PAK1IP1Q9NWT1 392 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 ERVK13-1Q9NX77 482 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 PCDH10Q9P2E7 1040 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 MAP10Q9P2G4 905 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 CD300AQ9UGN4 299 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 AKT3Q9Y243 479 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 WBP11Q9Y2W2 641 aaKnown RBP10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 CCDC162PA2VCL2 907 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 ZNF682O95780 498 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 LCKP06239 509 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 CDH5P33151 784 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 GNG2P59768 71 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 LAMTOR4Q0VGL1 99 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 SOWAHCQ53LP3 525 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 ZNF789Q5FWF6 425 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 EFL1Q7Z2Z2 1120 aaKnown RBP10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 FNDC5Q8NAU1 212 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 TWIST2Q8WVJ9 160 aa10.57□□□□□ -0.72
TRAPPC12-223ENST00000497597 TOP1MTQ969P6 601 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms