RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 PWWP2AQ96N64 755 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 PLEKHG4BQ96PX9 1271 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 KIFC1Q9BW19 673 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 MRM3Q9HC36 420 aaKnown RBP19.93■□□□□ 0.78
CTSD-206ENST00000497544 TM9SF3Q9HD45 589 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 TMEM74BQ9NUR3 256 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 APPL1Q9UKG1 709 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 RIMKLBQ9ULI2 386 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 SOX13Q9UN79 622 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 PCDHGA5Q9Y5G8 931 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 ATXN2Q99700 1313 aaKnown RBP19.93■□□□□ 0.78
CTSD-206ENST00000497544 TNRC6BQ9UPQ9 1833 aaKnown RBP19.92■□□□□ 0.78
CTSD-206ENST00000497544 POM121BA6NF01 834 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 BHMG1C9JSJ3 638 aaPredicted RBP19.92■□□□□ 0.78
CTSD-206ENST00000497544 EPN2O95208 641 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 TSHRP16473 764 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 TEAD4Q15561 434 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 HENMT1Q5T8I9 393 aaKnown RBP19.92■□□□□ 0.78
CTSD-206ENST00000497544 CENPUQ71F23 418 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 RABEPKQ7Z6M1 372 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 MFSD2AQ8NA29 543 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 PLA2G15Q8NCC3 412 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 C1orf216Q8TAB5 229 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 CEP76Q8TAP6 659 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 PEX13Q92968 403 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 STAMBPL1Q96FJ0 436 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 KLHDC7BQ96G42 594 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 CDKN2AIPNLQ96HQ2 116 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 FAM129AQ9BZQ8 928 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 FOXP3Q9BZS1 431 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 IL26Q9NPH9 171 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 NFKBIL1Q9UBC1 381 aaPredicted RBP19.92■□□□□ 0.78
CTSD-206ENST00000497544 FKBPLQ9UIM3 349 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 FREM2Q5SZK8 3169 aa19.92■□□□□ 0.78
CTSD-206ENST00000497544 GLYATL1P3A0A0U1RQE8 302 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 A6NNZ2 444 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 H0Y8X5 98 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 TOR1BO14657 336 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 MAGEC1O60732 1142 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 HOXD12P35452 270 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 AFF3P51826 1226 aaKnown RBP19.91■□□□□ 0.78
CTSD-206ENST00000497544 PRAMEP78395 509 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 PDIA2Q13087 525 aaKnown RBP19.91■□□□□ 0.78
CTSD-206ENST00000497544 DUOXA1Q1HG43 343 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 MSS51Q4VC12 460 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 ZDHHC24Q6UX98 284 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 FAM151BQ6UXP7 276 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 GCNT7Q6ZNI0 430 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 Q6ZSR6 202 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 PTAR1Q7Z6K3 402 aaPredicted RBP19.91■□□□□ 0.78
CTSD-206ENST00000497544 ABI3BPQ7Z7G0 1075 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 TRAM1L1Q8N609 369 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 LRRC39Q96DD0 335 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 TBATAQ96M53 351 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 ZNF778Q96MU6 729 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 EBNA1BP2Q99848 306 aaKnown RBP19.91■□□□□ 0.78
CTSD-206ENST00000497544 ZSCAN5AQ9BUG6 496 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 APOOQ9BUR5 198 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 RRAGDQ9NQL2 400 aaPredicted RBP19.91■□□□□ 0.78
CTSD-206ENST00000497544 GDF3Q9NR23 364 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 MTRF1LQ9UGC7 380 aaKnown RBP19.91■□□□□ 0.78
CTSD-206ENST00000497544 SLC2A6Q9UGQ3 507 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 SLCO1B1Q9Y6L6 691 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 SLC30A1Q9Y6M5 507 aa19.91■□□□□ 0.78
CTSD-206ENST00000497544 SCN8AQ9UQD0 1980 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 FAM237BA0A1B0GVD1 139 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 K7ESM1 405 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 EIF3HO15372 352 aaKnown RBP eCLIP19.9■□□□□ 0.78
CTSD-206ENST00000497544 BANF1O75531 89 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 PSMA3P25788 255 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 NMBRP28336 390 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 TEAD1P28347 426 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 TRIM23P36406 574 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 RABIFP47224 123 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 CSNK1EP49674 416 aaKnown RBP19.9■□□□□ 0.78
CTSD-206ENST00000497544 C21orf59P57076 290 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 YPEL5P62699 121 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 OVGP1Q12889 678 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 CUL1Q13616 776 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 CHRNA6Q15825 494 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 PEAR1Q5VY43 1037 aaPredicted RBP19.9■□□□□ 0.78
CTSD-206ENST00000497544 CES3Q6UWW8 571 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 KYAT3Q6YP21 454 aaKnown RBP19.9■□□□□ 0.78
CTSD-206ENST00000497544 IQCHQ86VS3 1027 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 CCNJLQ8IV13 435 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 PELI3Q8N2H9 469 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 ZNF398Q8TD17 642 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 DTX3LQ8TDB6 740 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 UBXN4Q92575 508 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 HDAC10Q969S8 669 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 AGAP2Q99490 1192 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 NAT9Q9BTE0 207 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 SMOC1Q9H4F8 434 aa19.9■□□□□ 0.78
CTSD-206ENST00000497544 A0A1W2PR77 199 aa19.89■□□□□ 0.77
CTSD-206ENST00000497544 H7C0S8 307 aa19.89■□□□□ 0.77
CTSD-206ENST00000497544 CCL22O00626 93 aa19.89■□□□□ 0.77
CTSD-206ENST00000497544 SRP72O76094 671 aaKnown RBP19.89■□□□□ 0.77
CTSD-206ENST00000497544 CFIP05156 583 aa19.89■□□□□ 0.77
CTSD-206ENST00000497544 THEGLP0DJG4 465 aa19.89■□□□□ 0.77
CTSD-206ENST00000497544 PAMP19021 973 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms