RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 FIZ1Q96SL8 496 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 GAD1Q99259 594 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 BAG1Q99933 345 aaPredicted RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 KXD1Q9BQD3 176 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 HAUS8Q9BT25 410 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 SF3B5Q9BWJ5 86 aaKnown RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 APOL6Q9BWW8 343 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 TMEM39BQ9GZU3 492 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 MRPL44Q9H9J2 332 aaKnown RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 C17orf75Q9HAS0 396 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 EPB41L5Q9HCM4 733 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 CNGB3Q9NQW8 809 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 MTMR10Q9NXD2 777 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 NFKBIL1Q9UBC1 381 aaPredicted RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 ACSL5Q9ULC5 683 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 PPIEQ9UNP9 301 aaKnown RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 PTRH2Q9Y3E5 179 aaKnown RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 CLIC4Q9Y696 253 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 FAM169AQ9Y6X4 670 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 H3BQ06 376 aaPredicted RBP4.03□□□□□ -1.76
SMC4-225ENST00000497203 M0QZ24 198 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 MAP2K7O14733 419 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 TIMM23O14925 209 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 PAPSS1O43252 624 aaPredicted RBP4.03□□□□□ -1.76
SMC4-225ENST00000497203 ADAM20O43506 726 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 CH25HO95992 272 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 TPOP07202 933 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 G6PDP11413 515 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 EIF2S3P41091 472 aaKnown RBP4.03□□□□□ -1.76
SMC4-225ENST00000497203 MSH2P43246 934 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 FASLGP48023 281 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 PGGT1BP53609 377 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 PSMC6P62333 389 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 ECT2LQ008S8 904 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 FOXM1Q08050 763 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 GRSF1Q12849 480 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMC4-225ENST00000497203 TRAF2Q12933 501 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 GPS2Q13227 327 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 MAD2L1Q13257 205 aaPredicted RBP4.03□□□□□ -1.76
SMC4-225ENST00000497203 TNFAIP1Q13829 316 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 HNF4GQ14541 408 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 EIF2S3LQ2VIR3 472 aaKnown RBP4.03□□□□□ -1.76
SMC4-225ENST00000497203 DCST1Q5T197 706 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 FRG2Q64ET8 278 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 B3GNT6Q6ZMB0 384 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 SDCCAG8Q86SQ7 713 aaPredicted RBP4.03□□□□□ -1.76
SMC4-225ENST00000497203 KBTBD6Q86V97 674 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 SCYL3Q8IZE3 742 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 OR1J2Q8NGS2 313 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 MAGEC3Q8TD91 643 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 EGLN2Q96KS0 407 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 GCNAQ96QF7 691 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 DCLK3Q9C098 648 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 TAB2Q9NYJ8 693 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 WSB2Q9NYS7 404 aaPredicted RBP4.03□□□□□ -1.76
SMC4-225ENST00000497203 STK39Q9UEW8 545 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 INSL5Q9Y5Q6 135 aa4.03□□□□□ -1.76
SMC4-225ENST00000497203 MAGED1Q9Y5V3 778 aaPredicted RBP4.03□□□□□ -1.76
SMC4-225ENST00000497203 GOLGA6L9A6NEM1 432 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 J3KR12 359 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 SPINT2O43291 252 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 SMAD6O43541 496 aaKnown RBP4.02□□□□□ -1.77
SMC4-225ENST00000497203 SERPINI2O75830 405 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 GAGE7O76087 117 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 EGFP01133 1207 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 ICAM1P05362 532 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 TUBBP07437 444 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 GAGE12FP0CL80 117 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 GAGE12GP0CL81 117 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 GAGE12IP0CL82 117 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 MMP9P14780 707 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 C21orf33P30042 268 aaPredicted RBP4.02□□□□□ -1.77
SMC4-225ENST00000497203 CDC25AP30304 524 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 HOXA11P31270 313 aaPredicted RBP4.02□□□□□ -1.77
SMC4-225ENST00000497203 CDKN2AP42771 156 aaKnown RBP4.02□□□□□ -1.77
SMC4-225ENST00000497203 RFX5P48382 616 aaPredicted RBP4.02□□□□□ -1.77
SMC4-225ENST00000497203 COMPP49747 757 aaPredicted RBP4.02□□□□□ -1.77
SMC4-225ENST00000497203 LIG4P49917 911 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 MXI1P50539 228 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 ARSEP51690 589 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 GAGE1Q13065 139 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 GAGE4Q13068 117 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 PSMD6Q15008 389 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 CTF1Q16619 201 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 LINC00346Q8IVM7 164 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 MINDY1Q8N5J2 469 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 POGLUT1Q8NBL1 392 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 OR14A16Q8NHC5 309 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 B4GALNT2Q8NHY0 566 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 OIT3Q8WWZ8 545 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 TXNDC15Q96J42 360 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 CNDP2Q96KP4 475 aaKnown RBP4.02□□□□□ -1.77
SMC4-225ENST00000497203 CEP295NLQ96MC4 621 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 DACH2Q96NX9 599 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 PAFAH2Q99487 392 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 KRTAP1-5Q9BYS1 174 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 PIGMQ9H3S5 423 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 RABEP2Q9H5N1 569 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 MMP25Q9NPA2 562 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 SLC9A2Q9UBY0 812 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms