RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 RABIFP47224 123 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 ARCN1P48444 511 aaKnown RBP21.61■■□□□ 1.05
C9orf3-222ENST00000496567 OVGP1Q12889 678 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 FRG1Q14331 258 aaKnown RBP21.61■■□□□ 1.05
C9orf3-222ENST00000496567 FASTKD1Q53R41 847 aaKnown RBP21.61■■□□□ 1.05
C9orf3-222ENST00000496567 IQCHQ86VS3 1027 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 SYT12Q8IV01 421 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 MFSD2AQ8NA29 543 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 GABPB2Q8TAK5 448 aaPredicted RBP21.61■■□□□ 1.05
C9orf3-222ENST00000496567 BTN2A2Q8WVV5 523 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 SKA1Q96BD8 255 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 APOOQ9BUR5 198 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 TEX101Q9BY14 249 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 PHPT1Q9NRX4 125 aaPredicted RBP21.61■■□□□ 1.05
C9orf3-222ENST00000496567 C20orf96Q9NUD7 363 aaPredicted RBP21.61■■□□□ 1.05
C9orf3-222ENST00000496567 SMOXQ9NWM0 555 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 CRLS1Q9UJA2 301 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 PILRBQ9UKJ0 227 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 A0A1B0GTW7 788 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 AGAP14A8MT82 685 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 H0Y8X5 98 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 UGT1A9O60656 530 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 MAGEC1O60732 1142 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 HOXC4P09017 264 aaPredicted RBP21.6■■□□□ 1.05
C9orf3-222ENST00000496567 FAM153BP0C7A2 387 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 UGT1A6P19224 532 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 UGT1A1P22309 533 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 UGT1A4P22310 534 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 ARNTP27540 789 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 FOXN2P32314 431 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 UGT1A3P35503 534 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 UGT1A5P35504 534 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 AFF3P51826 1226 aaKnown RBP21.6■■□□□ 1.05
C9orf3-222ENST00000496567 PFN3P60673 137 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 THOC5Q13769 683 aaKnown RBP21.6■■□□□ 1.05
C9orf3-222ENST00000496567 FAM153CQ494X1 144 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 C3orf62Q6ZUJ4 267 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 PTAR1Q7Z6K3 402 aaPredicted RBP21.6■■□□□ 1.05
C9orf3-222ENST00000496567 RABEPKQ7Z6M1 372 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 HEATR4Q86WZ0 1026 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 CALML6Q8TD86 181 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 PIGKQ92643 395 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 GLYATL1Q969I3 302 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 HIC2Q96JB3 615 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 TTC1Q99614 292 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 SEMA4AQ9H3S1 761 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 UGT1A7Q9HAW7 530 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 UGT1A10Q9HAW8 530 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 UGT1A8Q9HAW9 530 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 CATSPERZQ9NTU4 200 aa21.6■■□□□ 1.05
C9orf3-222ENST00000496567 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.6■■□□□ 1.05
C9orf3-222ENST00000496567 TNRC6BQ9UPQ9 1833 aaKnown RBP21.59■■□□□ 1.05
C9orf3-222ENST00000496567 WDFY4Q6ZS81 3184 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 OR51F1A6NGY5 319 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 CACNB4O00305 520 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-222ENST00000496567 SLC25A14O95258 325 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-222ENST00000496567 PPARGP37231 505 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-222ENST00000496567 CDK3Q00526 305 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 TEAD4Q15561 434 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 LPAL2Q16609 132 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 AARS2Q5JTZ9 985 aaKnown RBP21.59■■□□□ 1.05
C9orf3-222ENST00000496567 PEAR1Q5VY43 1037 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-222ENST00000496567 MRNIPQ6NTE8 343 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 Q6ZSR6 202 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 TAS2R42Q7RTR8 314 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 KCNMB4Q86W47 210 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 DCP2Q8IU60 420 aaKnown RBP21.59■■□□□ 1.05
C9orf3-222ENST00000496567 PHYKPLQ8IUZ5 450 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 LMNTD2Q8IXW0 634 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 KLHDC7BQ96G42 594 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 CDC42EP4Q9H3Q1 356 aaKnown RBP21.59■■□□□ 1.05
C9orf3-222ENST00000496567 PLAC1Q9HBJ0 212 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 LRRC4CQ9HCJ2 640 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 SMG5Q9UPR3 1016 aaKnown RBP21.59■■□□□ 1.05
C9orf3-222ENST00000496567 HCN4Q9Y3Q4 1203 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 OR1A2Q9Y585 309 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 SLCO1B1Q9Y6L6 691 aa21.59■■□□□ 1.05
C9orf3-222ENST00000496567 ATXN2Q99700 1313 aaKnown RBP21.59■■□□□ 1.05
C9orf3-222ENST00000496567 TRBV5-4A0A0C4DH59 114 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 A0A1W2PR77 199 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 INPP4BO15327 924 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 CD3EAPO15446 510 aaKnown RBP21.58■■□□□ 1.05
C9orf3-222ENST00000496567 THEGLP0DJG4 465 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 MYCLP1P12525 358 aaPredicted RBP21.58■■□□□ 1.05
C9orf3-222ENST00000496567 HTR1BP28222 390 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 SSTR1P30872 391 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 KYNUQ16719 465 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 LDLRAP1Q5SW96 308 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 LYPLAL1Q5VWZ2 237 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 LAIR1Q6GTX8 287 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 NEPROQ6NW34 567 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 CERS6Q6ZMG9 384 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 CAPN12Q6ZSI9 719 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 CEP76Q8TAP6 659 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 GDAP1Q8TB36 358 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 FUBP1Q96AE4 644 aaKnown RBP21.58■■□□□ 1.05
C9orf3-222ENST00000496567 CERS2Q96G23 380 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 FAM96AQ9H5X1 160 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 VPS37BQ9H9H4 285 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 PPANQ9NQ55 473 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms