RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 RIMS3Q9UJD0 308 aa11.48□□□□□ -0.57
CDCA7-208ENST00000496441 MED16Q9Y2X0 877 aa11.48□□□□□ -0.57
CDCA7-208ENST00000496441 AP4S1Q9Y587 144 aa11.48□□□□□ -0.57
CDCA7-208ENST00000496441 SQORQ9Y6N5 450 aa11.48□□□□□ -0.57
CDCA7-208ENST00000496441 XIRP2A4UGR9 3374 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 FAM92AA1XBS5 289 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 ARVCFO00192 962 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 ANGPT2O15123 496 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 TBL1XO60907 577 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 PSMC3P17980 439 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 RAD51Q06609 339 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 UGT3A2Q3SY77 523 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 LHX8Q68G74 356 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 FAM151BQ6UXP7 276 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 SPPL2CQ8IUH8 684 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 HERC6Q8IVU3 1022 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 LINGO1Q96FE5 620 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 FAR2Q96K12 515 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 TEX37Q96LM6 180 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 PSKH2Q96QS6 385 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 HMX1Q9NP08 348 aaPredicted RBP11.47□□□□□ -0.57
CDCA7-208ENST00000496441 IL37Q9NZH6 218 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 C6orf203Q9P0P8 240 aaPredicted RBP11.47□□□□□ -0.57
CDCA7-208ENST00000496441 PDP2Q9P2J9 529 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 EIF2B4Q9UI10 523 aaKnown RBP11.47□□□□□ -0.57
CDCA7-208ENST00000496441 NUP214P35658 2090 aaPredicted RBP11.47□□□□□ -0.57
CDCA7-208ENST00000496441 MYOFQ9NZM1 2061 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.47□□□□□ -0.57
CDCA7-208ENST00000496441 PRRG1O14668 218 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 TMCC1O94876 653 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 MBL2P11226 248 aaPredicted RBP11.47□□□□□ -0.57
CDCA7-208ENST00000496441 CAPN3P20807 821 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 RPL10P27635 214 aaKnown RBP11.47□□□□□ -0.57
CDCA7-208ENST00000496441 CREB5Q02930 508 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 TRAF2Q12933 501 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 AAK1Q2M2I8 961 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 SETMARQ53H47 684 aaPredicted RBP11.47□□□□□ -0.57
CDCA7-208ENST00000496441 TPGS1Q6ZTW0 290 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 CHSY3Q70JA7 882 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 CAMK1DQ8IU85 385 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 STAG3L4Q8TBR4 150 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 NMD3Q96D46 503 aaKnown RBP11.47□□□□□ -0.57
CDCA7-208ENST00000496441 ATOH8Q96SQ7 321 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 SLC25A23Q9BV35 468 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 UNC93B1Q9H1C4 597 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 MAGEH1Q9H213 219 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 SLAMF8Q9P0V8 285 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 POLG2Q9UHN1 485 aa11.47□□□□□ -0.57
CDCA7-208ENST00000496441 FNDC1Q4ZHG4 1894 aaPredicted RBP11.47□□□□□ -0.57
CDCA7-208ENST00000496441 MOXD2PA6NHM9 499 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 SAC3D1A6NKF1 404 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 ANKRD66B4E2M5 251 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 SNX2O60749 519 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 NCK1P16333 377 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 CHN2P52757 468 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 SMAD3P84022 425 aaKnown RBP11.46□□□□□ -0.57
CDCA7-208ENST00000496441 RING1Q06587 406 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 RABL3Q5HYI8 236 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 TXNDC8Q6A555 127 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 OR52B6Q8NGF0 335 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 WFDC5Q8TCV5 224 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 CANT1Q8WVQ1 401 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 ASB9Q96DX5 294 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 TRIB3Q96RU7 358 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 MGME1Q9BQP7 344 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 HGH1Q9BTY7 390 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 APOL5Q9BWW9 433 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 TDRD1Q9BXT4 1180 aaKnown RBP11.46□□□□□ -0.57
CDCA7-208ENST00000496441 GPR63Q9BZJ6 419 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 COQ10BQ9H8M1 238 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 TRPM5Q9NZQ8 1165 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 ZMYM5Q9UJ78 669 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 TRMT6Q9UJA5 497 aaKnown RBP11.46□□□□□ -0.57
CDCA7-208ENST00000496441 H3BNC9 293 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 GIPC1O14908 333 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 INPPL1O15357 1258 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 OR4F21O95013 312 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 MTHFD1P11586 935 aaKnown RBP11.46□□□□□ -0.57
CDCA7-208ENST00000496441 GJA1P17302 382 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 PAX3P23760 479 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 ZNF140P52738 457 aaPredicted RBP11.46□□□□□ -0.57
CDCA7-208ENST00000496441 CDH4P55283 916 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 RHOAP61586 193 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 ARF5P84085 180 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 MAPRE2Q15555 327 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 SLC14A2Q15849 920 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 LRRC73Q5JTD7 316 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 NPAS4Q8IUM7 802 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 FUBP1Q96AE4 644 aaKnown RBP11.46□□□□□ -0.57
CDCA7-208ENST00000496441 L3HYPDHQ96EM0 354 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 TMEM74Q96NL1 305 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 GRIP2Q9C0E4 1043 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 NLE1Q9NVX2 485 aaPredicted RBP11.46□□□□□ -0.57
CDCA7-208ENST00000496441 FNIP2Q9P278 1114 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 USP22Q9UPT9 525 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 ASB3Q9Y575 518 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 FRMPD3Q5JV73 1810 aa11.46□□□□□ -0.57
CDCA7-208ENST00000496441 PIKFYVEQ9Y2I7 2098 aa11.46□□□□□ -0.58
CDCA7-208ENST00000496441 DNAH14Q0VDD8 3507 aa11.46□□□□□ -0.58
CDCA7-208ENST00000496441 PDLIM1O00151 329 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms