RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 FGF1P05230 155 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 PROS1P07225 676 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 HLA-DPA1P20036 260 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 MAZP56270 477 aaKnown RBP17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 DCDC1P59894 354 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 SNX1Q13596 522 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 SIX1Q15475 284 aaPredicted RBP17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 KHDC1Q4VXA5 237 aaKnown RBP17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 PYCR3Q53H96 274 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 ZNF569Q5MCW4 686 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 ARHGEF18Q6ZSZ5 1173 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 TMPRSS12Q86WS5 348 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 GPBAR1Q8TDU6 330 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 ZCCHC14Q8WYQ9 949 aaKnown RBP17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 CCDC3Q9BQI4 270 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 FERMT1Q9BQL6 677 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 DPEP2Q9H4A9 486 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 TAAR2Q9P1P5 351 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 TMPRSS11EQ9UL52 423 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 KCTD3Q9Y597 815 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 PCDHB1Q9Y5F3 818 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 ARL5AQ9Y689 179 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 IGF2RP11717 2491 aa17.42■□□□□ 0.38
RHBDD3-207ENST00000496342 RGSL1A5PLK6 1076 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 C5orf60A6NFR6 353 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 LIASO43766 372 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 NRDCO43847 1150 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 MT-CO3P00414 261 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 EPOP01588 193 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 PYGLP06737 847 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 ETS1P14921 441 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 CXCR5P32302 372 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 TNNT3P45378 269 aaPredicted RBP17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 ILF3Q12906 894 aaKnown RBP eCLIP17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 PLA2G4EQ3MJ16 856 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 LVRNQ6Q4G3 990 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 RAVER1Q8IY67 606 aaKnown RBP17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 TRAM1L1Q8N609 369 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 GPR156Q8NFN8 814 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 SCG3Q8WXD2 468 aaKnown RBP17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 GLMNQ92990 594 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 SCARF2Q96GP6 870 aaPredicted RBP17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 TBL1YQ9BQ87 522 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 GSDMCQ9BYG8 508 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 PIH1D1Q9NWS0 290 aaKnown RBP17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 ATXN10Q9UBB4 475 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 NFKBIL1Q9UBC1 381 aaPredicted RBP17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 CLCA2Q9UQC9 943 aa17.41■□□□□ 0.38
RHBDD3-207ENST00000496342 TRABD2BA6NFA1 517 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 GP1BAP07359 652 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 ZNF8P17098 575 aaPredicted RBP17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 HMGCLP35914 325 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 ACTR1BP42025 376 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 RPIAP49247 311 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 ACTR1AP61163 376 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 E2F1Q01094 437 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 PRPSAP1Q14558 356 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 OASLQ15646 514 aaKnown RBP17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 ATP13A5Q4VNC0 1218 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 CDCP2Q5VXM1 449 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 DENND5AQ6IQ26 1287 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 CRTC3Q6UUV7 619 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 FAM151BQ6UXP7 276 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 RANBP10Q6VN20 620 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 GALNT13Q8IUC8 556 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 SDR16C5Q8N3Y7 309 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 GLIS1Q8NBF1 620 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 ZDHHC1Q8WTX9 485 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 CDH19Q9H159 772 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 OR2AG1Q9H205 316 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 CARD9Q9H257 536 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 EVA1BQ9NVM1 165 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 TRNAU1APQ9NX07 287 aaKnown RBP17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 IL17CQ9P0M4 197 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 ZNHIT2Q9UHR6 403 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 KCNK6Q9Y257 313 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 RNF215Q9Y6U7 377 aa17.4■□□□□ 0.38
RHBDD3-207ENST00000496342 CCL22O00626 93 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 GAPDHSO14556 408 aaPredicted RBP17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 SLC25A14O95258 325 aaPredicted RBP17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 EML2O95834 649 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 CAPNS1P04632 268 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 CDK4P11802 303 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 ACP5P13686 325 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 SPAM1P38567 509 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 MSLNQ13421 630 aaPredicted RBP17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 CHRNA6Q15825 494 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 C14orf28Q4W4Y0 310 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 KCTD11Q693B1 232 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 CHST15Q7LFX5 561 aaPredicted RBP17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 ADGRG6Q86SQ4 1221 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 REXO1L1PQ8IX06 675 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 KLHDC8BQ8IXV7 354 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 PDCD7Q8N8D1 485 aaKnown RBP17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 DCBLD1Q8N8Z6 715 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 Q8N9G6 341 aaPredicted RBP17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 TRIM58Q8NG06 486 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 NAT14Q8WUY8 206 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 NAT6Q93015 286 aa17.39■□□□□ 0.37
RHBDD3-207ENST00000496342 GLYATL1Q969I3 302 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms