RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 GIMD1P0DJR0 217 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 PAFAH1B1P43034 410 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 CHRNA4P43681 627 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 TMPRSS12Q86WS5 348 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 GPR26Q8NDV2 337 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 FAM46DQ8NEK8 389 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 GDAP1Q8TB36 358 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 IFI44Q8TCB0 444 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 MAGOHBQ96A72 148 aaKnown RBP16.26■□□□□ 0.19
SF3A1-209ENST00000496189 OR2M4Q96R27 311 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 BOCQ9BWV1 1114 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 TMEM168Q9H0V1 697 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 DPEP2Q9H4A9 486 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 RMI1Q9H9A7 625 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 SIRPGQ9P1W8 387 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 PAK5Q9P286 719 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 SPO11Q9Y5K1 396 aa16.26■□□□□ 0.19
SF3A1-209ENST00000496189 NCOR2Q9Y618 2525 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 ZW10O43264 779 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 SOD1P00441 154 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 JUPP14923 745 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 SPINK2P20155 84 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 FDFT1P37268 417 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 SPAM1P38567 509 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 GDF10P55107 478 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 ITGA9Q13797 1035 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 LRP8Q14114 963 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 MARK2Q7KZI7 788 aaKnown RBP16.25■□□□□ 0.19
SF3A1-209ENST00000496189 TMPRSS7Q7RTY8 843 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 LINC00523Q86TU6 105 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 TRIM74Q86UV6 250 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 PRELID2Q8N945 189 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 MAPK15Q8TD08 544 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 TTC25Q96NG3 672 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 AGAP2Q99490 1192 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 AP1M1Q9BXS5 423 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 ZCCHC2Q9C0B9 1178 aaKnown RBP16.25■□□□□ 0.19
SF3A1-209ENST00000496189 BPIFA1Q9NP55 256 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 ZNHIT2Q9UHR6 403 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 KLK13Q9UKR3 277 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 PADI4Q9UM07 663 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 TMEM98Q9Y2Y6 226 aa16.25■□□□□ 0.19
SF3A1-209ENST00000496189 EME2A4GXA9 379 aaPredicted RBP16.24■□□□□ 0.19
SF3A1-209ENST00000496189 ERI2A8K979 691 aaKnown RBP16.24■□□□□ 0.19
SF3A1-209ENST00000496189 B4DGG1 531 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 GPR89AB7ZAQ6 455 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 ZNF185O15231 689 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 TUBB4AP04350 444 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 CELA2BP08218 269 aaPredicted RBP16.24■□□□□ 0.19
SF3A1-209ENST00000496189 GPR89BP0CG08 455 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 BPIP17213 487 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 LPOP22079 712 aaPredicted RBP16.24■□□□□ 0.19
SF3A1-209ENST00000496189 POLD2P49005 469 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 GTF2H3Q13889 308 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 TAF1AQ15573 450 aaPredicted RBP16.24■□□□□ 0.19
SF3A1-209ENST00000496189 SMAD1Q15797 465 aaKnown RBP16.24■□□□□ 0.19
SF3A1-209ENST00000496189 CYP1B1Q16678 543 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 RANBP10Q6VN20 620 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 EFL1Q7Z2Z2 1120 aaKnown RBP16.24■□□□□ 0.19
SF3A1-209ENST00000496189 WDR48Q8TAF3 677 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 GRK7Q8WTQ7 553 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 GLYATL1Q969I3 302 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 COX14Q96I36 57 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 APOL2Q9BQE5 337 aa16.24■□□□□ 0.19
SF3A1-209ENST00000496189 LRP4O75096 1905 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 GLYATL1P3A0A0U1RQE8 302 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 FAM221BA6H8Z2 402 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 KIF2AO00139 706 aaPredicted RBP16.23■□□□□ 0.19
SF3A1-209ENST00000496189 PHF2O75151 1096 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 TOP3BO95985 862 aaKnown RBP16.23■□□□□ 0.19
SF3A1-209ENST00000496189 ADCY8P40145 1251 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 ACTR1BP42025 376 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 ACTR1AP61163 376 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 HES3Q5TGS1 186 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 SLC30A9Q6PML9 568 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 SYT10Q6XYQ8 523 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 SLC35F3Q8IY50 421 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 TTC30BQ8N4P2 665 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 DNAAF3Q8N9W5 541 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 BRSK1Q8TDC3 778 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 GPBAR1Q8TDU6 330 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 EID2BQ96D98 161 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 CAPZA3Q96KX2 299 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 SYNDIG1Q9H7V2 258 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 CAAP1Q9H8G2 361 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 IL17CQ9P0M4 197 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 APPL1Q9UKG1 709 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 WASF3Q9UPY6 502 aa16.23■□□□□ 0.19
SF3A1-209ENST00000496189 FADS2P1A8MWK0 482 aa16.22■□□□□ 0.19
SF3A1-209ENST00000496189 AURKAO14965 403 aa16.22■□□□□ 0.19
SF3A1-209ENST00000496189 VEGFDO43915 354 aa16.22■□□□□ 0.19
SF3A1-209ENST00000496189 METTL18O95568 372 aa16.22■□□□□ 0.19
SF3A1-209ENST00000496189 AP2A1O95782 977 aa16.22■□□□□ 0.19
SF3A1-209ENST00000496189 SLC2A4P14672 509 aa16.22■□□□□ 0.19
SF3A1-209ENST00000496189 ADRA1AP35348 466 aa16.22■□□□□ 0.19
SF3A1-209ENST00000496189 COILP38432 576 aaPredicted RBP16.22■□□□□ 0.19
SF3A1-209ENST00000496189 HADHAP40939 763 aa16.22■□□□□ 0.19
SF3A1-209ENST00000496189 KCNJ1P48048 391 aa16.22■□□□□ 0.19
SF3A1-209ENST00000496189 FNTAP49354 379 aa16.22■□□□□ 0.19
SF3A1-209ENST00000496189 CTBSQ01459 385 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms