RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 SLC18A3Q16572 532 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 PRICKLE4Q2TBC4 344 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 RILPL1Q5EBL4 403 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 NAA35Q5VZE5 725 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 SLC35E4Q6ICL7 350 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 TMCO3Q6UWJ1 677 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 IL20RBQ6UXL0 311 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 ZNF852Q6ZMS4 543 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 PRSS45Q7RTY3 260 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 PXKQ7Z7A4 578 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 GALNT5Q7Z7M9 940 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 KLHDC9Q8NEP7 349 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 ZCCHC10Q8TBK6 192 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 LRRC1Q9BTT6 524 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.06□□□□□ -1.76
CLTC-208ENST00000496076 ITPAQ9BY32 194 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 CCDC68Q9H2F9 335 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 SLC32A1Q9H598 525 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 TTC12Q9H892 705 aaPredicted RBP4.06□□□□□ -1.76
CLTC-208ENST00000496076 PCDH9Q9HC56 1237 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 DIAPH3Q9NSV4 1193 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 TMEM30AQ9NV96 361 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 CD207Q9UJ71 328 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 SARDHQ9UL12 918 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 FAF1Q9UNN5 650 aaPredicted RBP4.06□□□□□ -1.76
CLTC-208ENST00000496076 NFE2L3Q9Y4A8 694 aa4.06□□□□□ -1.76
CLTC-208ENST00000496076 IGKV6D-41A0A0C4DH26 115 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 SYNDIG1LA6NDD5 238 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 B4DLN1 442 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 KLRF2D3W0D1 207 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 PER2O15055 1255 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 MTA2O94776 668 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 CLEC3BP05452 202 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 AKR1B1P15121 316 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 ZNF8P17098 575 aaPredicted RBP4.05□□□□□ -1.76
CLTC-208ENST00000496076 ITGAXP20702 1163 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 NFKBIAP25963 317 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 HOXD13P35453 343 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 GPD2P43304 727 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 UFM1P61960 85 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 NEXNQ0ZGT2 675 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 PTP4A2Q12974 167 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 MAMLD1Q13495 774 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 ZNF766Q5HY98 468 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 PDSS1Q5T2R2 415 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 SUSD1Q6UWL2 747 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 KCTD8Q6ZWB6 473 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 IKBIPQ70UQ0 350 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 GJC3Q8NFK1 279 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 ETNPPLQ8TBG4 499 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 SNRNP27Q8WVK2 155 aaKnown RBP4.05□□□□□ -1.76
CLTC-208ENST00000496076 ABTB1Q969K4 478 aaPredicted RBP4.05□□□□□ -1.76
CLTC-208ENST00000496076 SERINC2Q96SA4 455 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 ATOH8Q96SQ7 321 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 CLSTN3Q9BQT9 956 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 FSD1Q9BTV5 496 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 LMAN2LQ9H0V9 348 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 BEX4Q9NWD9 120 aaPredicted RBP4.05□□□□□ -1.76
CLTC-208ENST00000496076 MCM9Q9NXL9 1143 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 NSMCE4AQ9NXX6 385 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 CISD1Q9NZ45 108 aaKnown RBP4.05□□□□□ -1.76
CLTC-208ENST00000496076 SLC25A10Q9UBX3 287 aaPredicted RBP4.05□□□□□ -1.76
CLTC-208ENST00000496076 KAT6BQ8WYB5 2073 aa4.05□□□□□ -1.76
CLTC-208ENST00000496076 TEX13CA0A0J9YWL9 993 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 NPIPB15A6NHN6 443 aaPredicted RBP4.04□□□□□ -1.76
CLTC-208ENST00000496076 AKR1B15C9JRZ8 316 aaPredicted RBP4.04□□□□□ -1.76
CLTC-208ENST00000496076 PTGES3LE9PB15 166 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 TGFB1I1O43294 461 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 TNFSF14O43557 240 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 PCDH7O60245 1069 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 GJB3O75712 270 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 STARD3NLO95772 234 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 MLYCDO95822 493 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 SCGB1D1O95968 90 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 ITGA2P17301 1181 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 USP8P40818 1118 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 CTCFP49711 727 aaPredicted RBP4.04□□□□□ -1.76
CLTC-208ENST00000496076 CUL4AQ13619 759 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 RUNX2Q13950 521 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 MED22Q15528 200 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 SLC9B1Q4ZJI4 515 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 STXBP4Q6ZWJ1 553 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 WDR63Q8IWG1 891 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 CHERPQ8IWX8 916 aaKnown RBP4.04□□□□□ -1.76
CLTC-208ENST00000496076 TTC39CQ8N584 583 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 TNIP2Q8NFZ5 429 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 MAGEC3Q8TD91 643 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 CNOT9Q92600 299 aaKnown RBP4.04□□□□□ -1.76
CLTC-208ENST00000496076 USP6NLQ92738 828 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 SNAPC3Q92966 411 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 SH3KBP1Q96B97 665 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 PIP5K1AQ99755 562 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 HEMGNQ9BXL5 484 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 RANBP17Q9H2T7 1088 aaKnown RBP4.04□□□□□ -1.76
CLTC-208ENST00000496076 EPHX3Q9H6B9 360 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 HCFC1R1Q9NWW0 138 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 PPP1R14DQ9NXH3 145 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 KCND2Q9NZV8 630 aa4.04□□□□□ -1.76
CLTC-208ENST00000496076 BCCIPQ9P287 314 aaKnown RBP eCLIP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms