RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 KCTD11Q693B1 232 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TBC1D3GQ6DHY5 549 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TBC1D3CQ6IPX1 549 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 NAPEPLDQ6IQ20 393 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 OGFOD2Q6N063 350 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 NEK5Q6P3R8 708 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 USP45Q70EL2 814 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 LINC00523Q86TU6 105 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CTAGE6Q86UF2 777 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CTAGE4Q8IX94 777 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TBC1D3Q8IZP1 549 aaPredicted RBP10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PLD6Q8N2A8 252 aaKnown RBP10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 FRMD1Q8N878 549 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 OR2T34Q8NGX1 318 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 STK35Q8TDR2 534 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ALKBH8Q96BT7 664 aaKnown RBP10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SCRN2Q96FV2 425 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TBL1YQ9BQ87 522 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 FICDQ9BVA6 458 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 GPR174Q9BXC1 333 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 RBCK1Q9BYM8 510 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 IRF2BPLQ9H1B7 796 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 KCNH6Q9H252 994 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PREBQ9HCU5 417 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PCDH12Q9NPG4 1184 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ASIC3Q9UHC3 531 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PPIL1Q9Y3C6 166 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 NEU2Q9Y3R4 380 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 FADS3Q9Y5Q0 445 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 U3KQE9 123 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 NUMA1Q14980 2115 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 MYLKQ15746 1914 aa10.13□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TNRC6BQ9UPQ9 1833 aaKnown RBP10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PRR23AA6NEV1 266 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CAPN8A6NHC0 703 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 AREL1O15033 823 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TTI1O43156 1089 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PCDH8O95206 1070 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 AGTP01019 485 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PRKCGP05129 697 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 FGF1P05230 155 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 APRTP07741 180 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CTPS1P17812 591 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 BCKDHBP21953 392 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ADRA1AP35348 466 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 MMP12P39900 470 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ADCY8P40145 1251 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SRSF5Q13243 272 aaKnown RBP10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PLCL1Q15111 1095 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SLC1A5Q15758 541 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SIRPB2Q5JXA9 342 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SYCP2LQ5T4T6 812 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 KIAA1161Q6NSJ0 714 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 RANBP10Q6VN20 620 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CEP68Q76N32 757 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 DPPA4Q7L190 304 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 JAMLQ86YT9 394 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 WFDC3Q8IUB2 231 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PRSS33Q8NF86 280 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CADM4Q8NFZ8 388 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CXorf40AQ8TE69 158 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 MCCC1Q96RQ3 725 aaPredicted RBP10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SRPK1Q96SB4 655 aaKnown RBP10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PCED1AQ9H1Q7 454 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 EIF2B3Q9NR50 452 aaKnown RBP10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 B4GALT6Q9UBX8 382 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 RAPGEFL1Q9UHV5 662 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 MBD1Q9UIS9 605 aaPredicted RBP10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TPX2Q9ULW0 747 aaKnown RBP10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ITM2BQ9Y287 266 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SPAG17Q6Q759 2223 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PLXNA2O75051 1894 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TRPM6Q9BX84 2022 aa10.12□□□□□ -0.79
RAB11FIP3-211ENST00000495663 NPIPB15A6NHN6 443 aaPredicted RBP10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 USP12O75317 370 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SUN1O94901 812 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ALPIP09923 528 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ATXN1LP0C7T5 689 aaKnown RBP10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ELFN1P0C7U0 828 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ZNF30P17039 623 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ITIH2P19823 946 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TPSB2P20231 275 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 VIPR1P32241 457 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 HNF1BP35680 557 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 RPS21P63220 83 aaKnown RBP10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SARNPP82979 210 aaKnown RBP10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CDK16Q00536 496 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TCF15Q12870 199 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ARHGEF7Q14155 803 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SPARCL1Q14515 664 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TPSAB1Q15661 275 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ELF2Q15723 593 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 KCTD19Q17RG1 926 aaPredicted RBP10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TMEM52BQ4KMG9 183 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SPDYCQ5MJ68 293 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 KIAA0895LQ68EN5 471 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 C8orf74Q6P047 294 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PPP1R21Q6ZMI0 780 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 LPCAT2Q7L5N7 544 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PCGF5Q86SE9 256 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms