RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 ACTL9Q8TC94 416 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 STRADBQ9C0K7 418 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 TMEM248Q9NWD8 314 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 SMARCAL1Q9NZC9 954 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 ACSL6Q9UKU0 697 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 DRG1Q9Y295 367 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 PRRC2CQ9Y520 2896 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 ARHGAP42A6NI28 874 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 A8MX80 341 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 B4DGG1 531 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 H7C0C1 242 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 B4GAT1O43505 415 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 MFSD11O43934 449 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 RASGRP1O95267 797 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 ITGB2P05107 769 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 AMPD1P23109 780 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 MPSTP25325 297 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 STIP1P31948 543 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 COILP38432 576 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 ATP5OP48047 213 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 LIG3P49916 1009 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 NDST2P52849 883 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 MAZP56270 477 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 OR1D5P58170 312 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 YBEYP58557 167 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 EIF3EP60228 445 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 NFATC4Q14934 902 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 CYTH1Q15438 398 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 AMZ1Q400G9 498 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 HIST2H2BCQ6DN03 193 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 TIGD7Q6NT04 549 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 C4orf22Q6V702 233 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 ZNF574Q6ZN55 896 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 GSTA5Q7RTV2 222 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 SPRED1Q7Z699 444 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 SLITRK4Q8IW52 837 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 KLHL7Q8IXQ5 586 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 PLPP6Q8IY26 295 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 FSTL5Q8N475 847 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 ATPAF2Q8N5M1 289 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 CCDC89Q8N998 374 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 FAM46DQ8NEK8 389 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 ATL2Q8NHH9 583 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 WDR48Q8TAF3 677 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 SLC35B2Q8TB61 432 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 PTCD2Q8WV60 388 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 RNF31Q96EP0 1072 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 TBATAQ96M53 351 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 QKIQ96PU8 341 aaKnown RBP eCLIP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 KRT12Q99456 494 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 LGR4Q9BXB1 951 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 FAM129AQ9BZQ8 928 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 DDX47Q9H0S4 455 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 TMEM168Q9H0V1 697 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 EPN3Q9H201 632 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 FGF22Q9HCT0 170 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 PCDH12Q9NPG4 1184 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 LRIT1Q9P2V4 623 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 LHX3Q9UBR4 397 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 KLQ9UEF7 1012 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 UTP11Q9Y3A2 253 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 HEY1Q9Y5J3 304 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 CENPEQ02224 2701 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 NOTCH2Q04721 2471 aa11.74□□□□□ -0.53
CSNK1E-212ENST00000494610 KDELR3O43731 214 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 RAMP2O60895 175 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 ALPIP09923 528 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 RBP3P10745 1247 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 RGRP47804 291 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 RHOAP61586 193 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 B4GALNT1Q00973 533 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 EIF3IQ13347 325 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 PPP1R7Q15435 360 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 PARP15Q460N3 678 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 TMEM52BQ4KMG9 183 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 CERCAMQ5T4B2 595 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 DARS2Q6PI48 645 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 TAF8Q7Z7C8 310 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 GKN2Q86XP6 184 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 UMODL1-AS1Q8N2C9 162 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 TFB1MQ8WVM0 346 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 C1orf54Q8WWF1 131 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 PATE1Q8WXA2 126 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 SCG3Q8WXD2 468 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 HDAC11Q96DB2 347 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 HMCESQ96FZ2 354 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 NSMCE3Q96MG7 304 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 GDAP1L1Q96MZ0 367 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 TMEM74Q96NL1 305 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 OLFM3Q96PB7 478 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 RBM15Q96T37 977 aaKnown RBP eCLIP11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 NUDT22Q9BRQ3 303 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 OSBPL1AQ9BXW6 950 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 SLC25A18Q9H1K4 315 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 SPATS2LQ9NUQ6 558 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 DTLQ9NZJ0 730 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 ANKMY1Q9P2S6 941 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 ZNF148Q9UQR1 794 aa11.73□□□□□ -0.53
CSNK1E-212ENST00000494610 TCRBV7S2A1N4TA0A589 114 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 TTC24A2A3L6 582 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms