RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 D6RAR5 112 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 NUDT21O43809 227 aaKnown RBP32.95■■■□□ 2.87
CBX4-203ENST00000494546 ECEL1O95672 775 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 PNLIPP16233 465 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 RBL1P28749 1068 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 CETN2P41208 172 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 OTUD4Q01804 1114 aaKnown RBP32.95■■■□□ 2.87
CBX4-203ENST00000494546 KIF5AQ12840 1032 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 PEX6Q13608 980 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 FOXR1Q6PIV2 292 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 TXLNBQ8N3L3 684 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 SNIP1Q8TAD8 396 aaKnown RBP32.95■■■□□ 2.87
CBX4-203ENST00000494546 ACTL9Q8TC94 416 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 ALG3Q92685 438 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 FCRL5Q96RD9 977 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 RAD18Q9NS91 495 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 VPS18Q9P253 973 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 RSPH14Q9UHP6 348 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 PRKAB1Q9Y478 270 aa32.95■■■□□ 2.87
CBX4-203ENST00000494546 ZFHX4Q86UP3 3567 aa32.95■■■□□ 2.86
CBX4-203ENST00000494546 EIF2S3P41091 472 aaKnown RBP32.94■■■□□ 2.86
CBX4-203ENST00000494546 BIRC2Q13490 618 aa32.94■■■□□ 2.86
CBX4-203ENST00000494546 AADACL2Q6P093 401 aa32.94■■■□□ 2.86
CBX4-203ENST00000494546 SPRED1Q7Z699 444 aa32.94■■■□□ 2.86
CBX4-203ENST00000494546 B3GNT8Q7Z7M8 397 aa32.94■■■□□ 2.86
CBX4-203ENST00000494546 SLC25A41Q8N5S1 370 aa32.94■■■□□ 2.86
CBX4-203ENST00000494546 PATE1Q8WXA2 126 aa32.94■■■□□ 2.86
CBX4-203ENST00000494546 OXNAD1Q96HP4 312 aaPredicted RBP32.94■■■□□ 2.86
CBX4-203ENST00000494546 SRPK1Q96SB4 655 aaKnown RBP32.94■■■□□ 2.86
CBX4-203ENST00000494546 TRHDEQ9UKU6 1024 aa32.94■■■□□ 2.86
CBX4-203ENST00000494546 AMFRQ9UKV5 643 aa32.94■■■□□ 2.86
CBX4-203ENST00000494546 A0A0U1RQJ8 604 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 LOC285095A0A1B0GVY8 99 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 A0A1W2PNU3 283 aaPredicted RBP32.93■■■□□ 2.86
CBX4-203ENST00000494546 RHPN2P1A8MT19 583 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 RRP8O43159 456 aaKnown RBP32.93■■■□□ 2.86
CBX4-203ENST00000494546 DNAJC6O75061 913 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 PYGMP11217 842 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 PTPN7P35236 360 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 ZNF569Q5MCW4 686 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 LRRC69Q6ZNQ3 347 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 PEX26Q7Z412 305 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 C17orf82Q86X59 251 aaPredicted RBP32.93■■■□□ 2.86
CBX4-203ENST00000494546 ARL14Q8N4G2 192 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 IPMKQ8NFU5 416 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 MRGPRX2Q96LB1 330 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 ZNF578Q96N58 590 aaPredicted RBP32.93■■■□□ 2.86
CBX4-203ENST00000494546 FAM118BQ9BPY3 351 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 FERMT1Q9BQL6 677 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 FOXP3Q9BZS1 431 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 ARFGAP3Q9NP61 516 aa32.93■■■□□ 2.86
CBX4-203ENST00000494546 ATXN7L1Q9ULK2 861 aaPredicted RBP32.93■■■□□ 2.86
CBX4-203ENST00000494546 PCYT1BQ9Y5K3 369 aaPredicted RBP32.93■■■□□ 2.86
CBX4-203ENST00000494546 GOLGA6L6A8MZA4 724 aa32.92■■■□□ 2.86
CBX4-203ENST00000494546 AURKAO14965 403 aa32.92■■■□□ 2.86
CBX4-203ENST00000494546 DCDC1P59894 354 aa32.92■■■□□ 2.86
CBX4-203ENST00000494546 LRP8Q14114 963 aa32.92■■■□□ 2.86
CBX4-203ENST00000494546 SIRPB2Q5JXA9 342 aa32.92■■■□□ 2.86
CBX4-203ENST00000494546 NAGSQ8N159 534 aa32.92■■■□□ 2.86
CBX4-203ENST00000494546 WDR36Q8NI36 951 aaKnown RBP32.92■■■□□ 2.86
CBX4-203ENST00000494546 ZSCAN5AQ9BUG6 496 aa32.92■■■□□ 2.86
CBX4-203ENST00000494546 EPB41L5Q9HCM4 733 aa32.92■■■□□ 2.86
CBX4-203ENST00000494546 DXOO77932 396 aaKnown RBP32.91■■■□□ 2.86
CBX4-203ENST00000494546 BPIP17213 487 aa32.91■■■□□ 2.86
CBX4-203ENST00000494546 RBMS1P29558 406 aaKnown RBP32.91■■■□□ 2.86
CBX4-203ENST00000494546 CHRNA4P43681 627 aa32.91■■■□□ 2.86
CBX4-203ENST00000494546 EIF3EP60228 445 aaKnown RBP32.91■■■□□ 2.86
CBX4-203ENST00000494546 MPP3Q13368 585 aa32.91■■■□□ 2.86
CBX4-203ENST00000494546 CHST15Q7LFX5 561 aaPredicted RBP32.91■■■□□ 2.86
CBX4-203ENST00000494546 CDKL3Q8IVW4 592 aaPredicted RBP32.91■■■□□ 2.86
CBX4-203ENST00000494546 SYCE1Q8N0S2 351 aa32.91■■■□□ 2.86
CBX4-203ENST00000494546 TRAM1L1Q8N609 369 aa32.91■■■□□ 2.86
CBX4-203ENST00000494546 BPIFA1Q9NP55 256 aa32.91■■■□□ 2.86
CBX4-203ENST00000494546 PACSIN2Q9UNF0 486 aaPredicted RBP32.91■■■□□ 2.86
CBX4-203ENST00000494546 ADAMTS20P59510 1910 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 ARHGEF17Q96PE2 2063 aaPredicted RBP32.9■■■□□ 2.86
CBX4-203ENST00000494546 CCDC187A0A096LP49 1063 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 PMS2P1A4D2B8 440 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 TJP3O95049 919 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 SLC25A14O95258 325 aaPredicted RBP32.9■■■□□ 2.86
CBX4-203ENST00000494546 EPOP01588 193 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 ITPKBP27987 946 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 ABCG1P45844 678 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 INHBCP55103 352 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 ZNF648Q5T619 568 aaPredicted RBP32.9■■■□□ 2.86
CBX4-203ENST00000494546 UBL4BQ8N7F7 174 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 GBA3Q9H227 469 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 RMI1Q9H9A7 625 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 ATXN10Q9UBB4 475 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 NFKBIL1Q9UBC1 381 aaPredicted RBP32.9■■■□□ 2.86
CBX4-203ENST00000494546 CELSR3Q9NYQ7 3312 aa32.9■■■□□ 2.86
CBX4-203ENST00000494546 FTCDO95954 541 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 PTMAP06454 111 aaKnown RBP32.89■■■□□ 2.86
CBX4-203ENST00000494546 RBP3P10745 1247 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 ALDH4A1P30038 563 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 OR1D5P58170 312 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 B4GALNT1Q00973 533 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 CCDC173Q0VFZ6 552 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 DARS2Q6PI48 645 aaKnown RBP32.89■■■□□ 2.86
CBX4-203ENST00000494546 TMEM74Q96NL1 305 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms