RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CSO75390 466 aaKnown RBP13.12□□□□□ -0.31
ERCC3-209ENST00000494464 SEC31AO94979 1220 aaKnown RBP13.12□□□□□ -0.31
ERCC3-209ENST00000494464 CLDN7O95471 211 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 IVLP07476 585 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 GOLGA6DP0CG33 693 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 PTPN3P26045 913 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 COPS2P61201 443 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 ADCY2Q08462 1091 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 TCEA2Q15560 299 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 KAZNQ674X7 775 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 OGFOD3Q6PK18 319 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 TAF8Q7Z7C8 310 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 CCDC50Q8IVM0 306 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 IFT20Q8IY31 132 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 GPBAR1Q8TDU6 330 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.12□□□□□ -0.31
ERCC3-209ENST00000494464 P3H4Q92791 437 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 SCAMP4Q969E2 229 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 SCARF2Q96GP6 870 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-209ENST00000494464 COX14Q96I36 57 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 TEKT5Q96M29 485 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 RUNDC3BQ96NL0 473 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 FUT8Q9BYC5 575 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 GSDMCQ9BYG8 508 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 GLOD4Q9HC38 313 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 GOLGA6AQ9NYA3 693 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 PKD2L2Q9NZM6 624 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 SIRPGQ9P1W8 387 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 NFKBIL1Q9UBC1 381 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-209ENST00000494464 SAE1Q9UBE0 346 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-209ENST00000494464 GULP1Q9UBP9 304 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 MOSPD1Q9UJG1 213 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 RAXQ9Y2V3 346 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 GPSM3Q9Y4H4 160 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 CELSR3Q9NYQ7 3312 aa13.12□□□□□ -0.31
ERCC3-209ENST00000494464 ACACAQ13085 2346 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 HACD1B0YJ81 288 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 NTN3O00634 580 aaPredicted RBP13.11□□□□□ -0.31
ERCC3-209ENST00000494464 MAP2K7O14733 419 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 RAD51CO43502 376 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 NOBOXO60393 691 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 PHF2O75151 1096 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 FUCA1P04066 466 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 PYGMP11217 842 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 PTPN7P35236 360 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 SPINT3P49223 89 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 WASHC5Q12768 1159 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 ILF3Q12906 894 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERCC3-209ENST00000494464 GALNT3Q14435 633 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 CYP1B1Q16678 543 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 ISXQ2M1V0 245 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 CERCAMQ5T4B2 595 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 HENMT1Q5T8I9 393 aaKnown RBP13.11□□□□□ -0.31
ERCC3-209ENST00000494464 RBM44Q6ZP01 1051 aaKnown RBP13.11□□□□□ -0.31
ERCC3-209ENST00000494464 BBS12Q6ZW61 710 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 HDXQ7Z353 690 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 KLHL7Q8IXQ5 586 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 FAM46DQ8NEK8 389 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 SNIP1Q8TAD8 396 aaKnown RBP13.11□□□□□ -0.31
ERCC3-209ENST00000494464 CCHCR1Q8TD31 782 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 AENQ8WTP8 325 aaKnown RBP13.11□□□□□ -0.31
ERCC3-209ENST00000494464 MAIP1Q8WWC4 291 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 CCDC74AQ96AQ1 378 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 QKIQ96PU8 341 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERCC3-209ENST00000494464 VAT1Q99536 393 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 AP1M1Q9BXS5 423 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 CDH19Q9H159 772 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 OGFRQ9NZT2 677 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 SUFUQ9UMX1 484 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 EFR3BQ9Y2G0 817 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 AK5Q9Y6K8 562 aa13.11□□□□□ -0.31
ERCC3-209ENST00000494464 ZFC3H1O60293 1989 aaKnown RBP13.1□□□□□ -0.31
ERCC3-209ENST00000494464 LAMA5O15230 3695 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 A0A087WV48 116 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 BRINP1O60477 761 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 DXOO77932 396 aaKnown RBP13.1□□□□□ -0.31
ERCC3-209ENST00000494464 NDST3O95803 873 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 APOC2P02655 101 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 PNLIPP16233 465 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 GLB1P16278 677 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 GNPDA1P46926 289 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 PDX1P52945 283 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 DCDC1P59894 354 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 CDK18Q07002 472 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 XRCC4Q13426 336 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 PEX6Q13608 980 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 DHX34Q14147 1143 aaKnown RBP13.1□□□□□ -0.31
ERCC3-209ENST00000494464 SPIDRQ14159 915 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 HLTFQ14527 1009 aaKnown RBP eCLIP13.1□□□□□ -0.31
ERCC3-209ENST00000494464 LLGL1Q15334 1064 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 C14orf28Q4W4Y0 310 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 EMBQ6PCB8 327 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 B4GALNT4Q76KP1 1039 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 LYSMD3Q7Z3D4 306 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 MAATS1Q7Z4T9 603 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 NRROSQ86YC3 692 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 SLC13A5Q86YT5 568 aaPredicted RBP13.1□□□□□ -0.31
ERCC3-209ENST00000494464 CCL4L1Q8NHW4 92 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 PTCD2Q8WV60 388 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms