RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 EXD1Q8NHP7 514 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 WDR36Q8NI36 951 aaKnown RBP8.48□□□□□ -1.05
LRCH3-219ENST00000494069 WDR48Q8TAF3 677 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 KCNE4Q8WWG9 221 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 KRT35Q92764 455 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 TADA1Q96BN2 335 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 GRAMD1AQ96CP6 724 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 HAUS1Q96CS2 278 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 IMP4Q96G21 291 aaKnown RBP8.48□□□□□ -1.05
LRCH3-219ENST00000494069 FCRL3Q96P31 734 aaPredicted RBP8.48□□□□□ -1.05
LRCH3-219ENST00000494069 OR2M4Q96R27 311 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 LYSMD1Q96S90 227 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 NUDT22Q9BRQ3 303 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 MLPHQ9BV36 600 aaPredicted RBP8.48□□□□□ -1.05
LRCH3-219ENST00000494069 GSDMCQ9BYG8 508 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 FAM83DQ9H4H8 585 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 C10orf88Q9H8K7 445 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 THSD1Q9NS62 852 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 KCTD5Q9NXV2 234 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 SHOC2Q9UQ13 582 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 PCDHA13Q9Y5I0 950 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 SPO11Q9Y5K1 396 aa8.48□□□□□ -1.05
LRCH3-219ENST00000494069 SOWAHDA6NJG2 315 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 RHPN2P1A8MT19 583 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 PLD2O14939 933 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 AURKAO14965 403 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 PPP1R12AO14974 1030 aaPredicted RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 NUDT21O43809 227 aaKnown RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 DNAJC6O75061 913 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 PMPCBO75439 489 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 LCA5LO95447 670 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 PRB1P04280 392 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 PNLIPP16233 465 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 ZFXP17010 805 aaPredicted RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 CA4P22748 312 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 MPSTP25325 297 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 CD1CP29017 333 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 ALDH4A1P30038 563 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 CCKBRP32239 447 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 ZNF75DP51815 510 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 RPL26P61254 145 aaKnown RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 CFHR1Q03591 330 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 WASHC5Q12768 1159 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 SRSF6Q13247 344 aaKnown RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 PRKD1Q15139 912 aaPredicted RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 TGIF1Q15583 401 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 TEX44Q53QW1 395 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 ARHGAP40Q5TG30 622 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 IGF2-ASQ6U949 168 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 PCSK4Q6UW60 755 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 ZNF438Q7Z4V0 828 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 NT5DC3Q86UY8 548 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 ZC3H18Q86VM9 953 aaKnown RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 GAS2L3Q86XJ1 694 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 VSIG1Q86XK7 387 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 SLITRK4Q8IW52 837 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 RCBTB1Q8NDN9 531 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 GPR26Q8NDV2 337 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 OR6C4Q8NGE1 309 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 KIAA1524Q8TCG1 905 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 WNT2BQ93097 391 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 LIN37Q96GY3 246 aaPredicted RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 HERPUD2Q9BSE4 406 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 HEMGNQ9BXL5 484 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 SLC25A51Q9H1U9 297 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 GLOD4Q9HC38 313 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 DDX56Q9NY93 547 aaKnown RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 PISDQ9UG56 409 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 ZNHIT2Q9UHR6 403 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 RPL26L1Q9UNX3 145 aaKnown RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 KCNK6Q9Y257 313 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 REXO2Q9Y3B8 237 aaKnown RBP8.47□□□□□ -1.05
LRCH3-219ENST00000494069 LOXL2Q9Y4K0 774 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 DUSP10Q9Y6W6 482 aa8.47□□□□□ -1.05
LRCH3-219ENST00000494069 hCG_1818297A0A087WSY0 165 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 EFSO43281 561 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 PSTPIP1O43586 416 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 MTX2O75431 263 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 CCL4P13236 92 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 ACP5P13686 325 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 ZNF8P17098 575 aaPredicted RBP8.46□□□□□ -1.06
LRCH3-219ENST00000494069 SLC5A2P31639 672 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 CSF2RBP32927 897 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 CA5AP35218 305 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 CHRNA4P43681 627 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 HADHBP55084 474 aaKnown RBP8.46□□□□□ -1.06
LRCH3-219ENST00000494069 CDK18Q07002 472 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 CLN3Q13286 438 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 C16orf72Q14CZ0 275 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 MAP9Q49MG5 647 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 ODF2Q5BJF6 829 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 PHF19Q5T6S3 580 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 KDELC1Q6UW63 502 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 RAD9BQ6WBX8 426 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 THSD4Q6ZMP0 1018 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 CHST15Q7LFX5 561 aaPredicted RBP8.46□□□□□ -1.06
LRCH3-219ENST00000494069 GPR155Q7Z3F1 870 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 TMC3Q7Z5M5 1100 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 CLEC14AQ86T13 490 aa8.46□□□□□ -1.06
LRCH3-219ENST00000494069 JAMLQ86YT9 394 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms