RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 KCNJ9Q92806 393 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 KIAA1191Q96A73 305 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 CNDP1Q96KN2 507 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 RPL10LQ96L21 214 aaKnown RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 MCCC1Q96RQ3 725 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 TRMOQ9BU70 441 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 MMADHCQ9H3L0 296 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 WDR55Q9H6Y2 383 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 SYTL2Q9HCH5 934 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 SPHK2Q9NRA0 654 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 GALPQ9UBC7 116 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 TRMT6Q9UJA5 497 aaKnown RBP10.59□□□□□ -0.71
CLCN6-208ENST00000494028 HCFC2Q9Y5Z7 792 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 COMMD10Q9Y6G5 202 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 SLC30A1Q9Y6M5 507 aa10.59□□□□□ -0.71
CLCN6-208ENST00000494028 LRRK1Q38SD2 2015 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 MYO7AQ13402 2215 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 GRXCR1A8MXD5 290 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 SUPT3HB4E1H0 165 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 UBFD1O14562 309 aaKnown RBP10.58□□□□□ -0.72
CLCN6-208ENST00000494028 PFDN6O15212 129 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 GYG2O15488 501 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 GSC2O15499 205 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 SUPT3HO75486 399 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ECI2O75521 394 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ESR1P03372 595 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 CYP17A1P05093 508 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 PYGLP06737 847 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 CA3P07451 260 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 C1SP09871 688 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 TYRP14679 529 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ARSAP15289 507 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 BPIP17213 487 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 GM2AP17900 193 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ITGALP20701 1170 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 LHCGRP22888 699 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 PIK3R1P27986 724 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 EPHA3P29320 983 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 HNF1BP35680 557 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 CPOXP36551 454 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 SPAM1P38567 509 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 PTGER3P43115 390 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 COPAP53621 1224 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 HERVK_113P63132 956 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 KDSRQ06136 332 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 BTKQ06187 659 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 RAD51Q06609 339 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 GALNT1Q10472 559 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-208ENST00000494028 KLF10Q13118 480 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 DMC1Q14565 340 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 TSNQ15631 228 aaKnown RBP10.58□□□□□ -0.72
CLCN6-208ENST00000494028 LSM12Q3MHD2 195 aaKnown RBP10.58□□□□□ -0.72
CLCN6-208ENST00000494028 WASHC2DQ5SRD0 308 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ZNF697Q5TEC3 545 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 METTL21CQ5VZV1 264 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 Q6ZVU0 165 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ACAD11Q709F0 780 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ADIPOR2Q86V24 386 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 CPNE9Q8IYJ1 553 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 RYBPQ8N488 228 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ITFG1Q8TB96 612 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 MAGEC3Q8TD91 643 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 MICAL1Q8TDZ2 1067 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 IRF7Q92985 503 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 OTUB2Q96DC9 234 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 RSPRY1Q96DX4 576 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 PHF21BQ96EK2 531 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 LINGO1Q96FE5 620 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 FAR2Q96K12 515 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 PPP1R36Q96LQ0 422 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ZSWIM3Q96MP5 696 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 SAMD11Q96NU1 681 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ERVK-6Q9BXR3 956 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ZDHHC6Q9H6R6 413 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ZFYVE1Q9HBF4 777 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 CD248Q9HCU0 757 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 TBC1D14Q9P2M4 693 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 ZMYM5Q9UJ78 669 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 PCDHB1Q9Y5F3 818 aa10.58□□□□□ -0.72
CLCN6-208ENST00000494028 TSPAN11A1L157 253 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 LRRC14BA6NHZ5 514 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 B2RBV5 119 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 WASH3PC4AMC7 463 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 CDC7O00311 574 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 BTN3A1O00481 513 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 PRMT5O14744 637 aaPredicted RBP10.57□□□□□ -0.72
CLCN6-208ENST00000494028 SLC22A2O15244 555 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 DCXO43602 365 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 KLK8O60259 260 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 MAGEC1O60732 1142 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 PAPLNO95428 1278 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 CLDN7O95471 211 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 TPBGLP0DKB5 382 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 NCF2P19878 526 aaPredicted RBP10.57□□□□□ -0.72
CLCN6-208ENST00000494028 IMPDH1P20839 514 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 PPARGP37231 505 aaPredicted RBP10.57□□□□□ -0.72
CLCN6-208ENST00000494028 CLCN7P51798 805 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 RAP1GDS1P52306 607 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 NFATC2Q13469 925 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms