RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 CNOT8Q9UFF9 292 aaKnown RBP14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 TBC1D29Q9UFV1 150 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 PADI1Q9ULC6 663 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 PPIL1Q9Y3C6 166 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 PCDHGC4Q9Y5F7 938 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 TCRBV5S1A1TA0A578 114 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 OR5K4A6NMS3 321 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 DNAJC6O75061 913 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 LRCH4O75427 683 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 FGF5P12034 268 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 F3P13726 295 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 CASP14P31944 242 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 MAPK9P45984 424 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 LBRQ14739 615 aaKnown RBP14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 UGT8Q16880 541 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 RALGPS1Q5JS13 557 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 CYB5D1Q6P9G0 228 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 USP45Q70EL2 814 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 MARK2Q7KZI7 788 aaKnown RBP14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 TSPAN33Q86UF1 283 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 HPS6Q86YV9 775 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 PDCD6IPQ8WUM4 868 aaKnown RBP14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 OR6C1Q96RD1 312 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 TUBGCP2Q9BSJ2 902 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 CNPY3Q9BT09 278 aa14.1□□□□□ -0.15
PRPF40A-211ENST00000493468 ANKRD62A6NC57 917 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 EEF2KO00418 725 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 POU3F2P20265 443 aaPredicted RBP14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 GFERP55789 205 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 UBE2IP63279 158 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 SLC10A7Q0GE19 358 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 TRAF2Q12933 501 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 MRPL49Q13405 166 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 ZNF235Q14590 738 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 EIF2S3LQ2VIR3 472 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 C1QL3Q5VWW1 255 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 ARHGAP36Q6ZRI8 547 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 PRSS42Q7Z5A4 293 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 TRIM74Q86UV6 250 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 RASGRP3Q8IV61 690 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 RAVER1Q8IY67 606 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 NPWQ8N729 165 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 EXD1Q8NHP7 514 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 FNIP1Q8TF40 1166 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 CT55Q8WUE5 264 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 MGME1Q9BQP7 344 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 TBC1D10AQ9BXI6 508 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 GPR87Q9BY21 358 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 ACTL8Q9H568 366 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 RMI1Q9H9A7 625 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 LHX9Q9NQ69 397 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 OGFRQ9NZT2 677 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 CPNE7Q9UBL6 633 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 LNPEPQ9UIQ6 1025 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 ERRFI1Q9UJM3 462 aaPredicted RBP14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 AP4E1Q9UPM8 1137 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 ZNF451Q9Y4E5 1061 aa14.09□□□□□ -0.15
PRPF40A-211ENST00000493468 DFFAO00273 331 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 SPAG6O75602 509 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 CEACAM4O75871 244 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 GFPT2O94808 682 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 PGLSO95336 258 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 ZNF30P17039 623 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 DESP17661 470 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 ERCC2P18074 760 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 TNFAIP3P21580 790 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 SH3BP2P78314 561 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 CHRNA6Q15825 494 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 PPP1R15BQ5SWA1 713 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 JMJD6Q6NYC1 403 aaPredicted RBP14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 DNAJC24Q6P3W2 148 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 RFX8Q6ZV50 586 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 MON1BQ7L1V2 547 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 PPP1R3BQ86XI6 285 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 SLC34A3Q8N130 599 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 Q8NA96 180 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 TCTN2Q96GX1 697 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 MCEEQ96PE7 176 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 NOD2Q9HC29 1040 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 ZNHIT2Q9UHR6 403 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 CD84Q9UIB8 345 aa14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 PCYT1BQ9Y5K3 369 aaPredicted RBP14.08□□□□□ -0.16
PRPF40A-211ENST00000493468 POLQO75417 2590 aa14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 TTC24A2A3L6 582 aaPredicted RBP14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 DPM1O60762 260 aa14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 PEX11BO96011 259 aa14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 CLCNKAP51800 687 aa14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 ZNF135P52742 658 aaPredicted RBP14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 RPL7AP62424 266 aaKnown RBP14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 LAMB3Q13751 1172 aa14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 TPD52L1Q16890 204 aaPredicted RBP14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 CLEC16AQ2KHT3 1053 aa14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 PRR30Q53SZ7 412 aaPredicted RBP14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 ARMC12Q5T9G4 340 aa14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 CPZQ66K79 652 aa14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 LRRC66Q68CR7 880 aa14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 RFLNAQ6ZTI6 216 aa14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 CHST15Q7LFX5 561 aaPredicted RBP14.07□□□□□ -0.16
PRPF40A-211ENST00000493468 SYVN1Q86TM6 617 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms